RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 TMEM106AQ96A25 262 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 SEC22CQ9BRL7 303 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 GHITMQ9H3K2 345 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 SLA2Q9H6Q3 261 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 SHISA8B8ZZ34 492 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 SLC25A12O75746 678 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 SPARCP09486 303 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 NME1P15531 152 aaKnown RBP15.47■□□□□ 0.07
RXRB-201ENST00000374680 CD53P19397 219 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 IGLV3-21P80748 117 aaPredicted RBP15.47■□□□□ 0.07
RXRB-201ENST00000374680 PLCXD2Q0VAA5 305 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 CCDC58Q4VC31 144 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 TMEM69Q5SWH9 247 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 ARHGAP40Q5TG30 622 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 FAM69BQ5VUD6 431 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 GLB1L2Q8IW92 636 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 OR2T4Q8NH00 348 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 RNF166Q96A37 237 aaPredicted RBP15.47■□□□□ 0.07
RXRB-201ENST00000374680 STMN3Q9NZ72 180 aa15.47■□□□□ 0.07
RXRB-201ENST00000374680 SLC16A7O60669 478 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 ZNF24P17028 368 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 IL11P20809 199 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 CDK2P24941 298 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 PPICP45877 212 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 FASLGP48023 281 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 MMP15P51511 669 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 RPS4XP62701 263 aaKnown RBP15.46■□□□□ 0.07
RXRB-201ENST00000374680 OC90Q02509 493 aaPredicted RBP15.46■□□□□ 0.07
RXRB-201ENST00000374680 CFHR1Q03591 330 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 C9orf40Q8IXQ3 194 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 SLC35F3Q8IY50 421 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 METTL21AQ8WXB1 218 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 WDR89Q96FK6 387 aaPredicted RBP15.46■□□□□ 0.07
RXRB-201ENST00000374680 SLC7A5P2Q9GIP4 190 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 CTSFQ9UBX1 484 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 CAMK2AQ9UQM7 478 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 HIF3AQ9Y2N7 669 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 LRP4O75096 1905 aa15.46■□□□□ 0.07
RXRB-201ENST00000374680 TLCD2A6NGC4 264 aa15.46■□□□□ 0.06
RXRB-201ENST00000374680 ANXA2P2A6NMY6 339 aa15.46■□□□□ 0.06
RXRB-201ENST00000374680 ZNF593O00488 134 aaPredicted RBP15.46■□□□□ 0.06
RXRB-201ENST00000374680 ARPC1BO15143 372 aaKnown RBP15.46■□□□□ 0.06
RXRB-201ENST00000374680 OR6A2O95222 327 aa15.46■□□□□ 0.06
RXRB-201ENST00000374680 ANXA2P07355 339 aaKnown RBP15.46■□□□□ 0.06
RXRB-201ENST00000374680 PITPNAQ00169 270 aa15.46■□□□□ 0.06
RXRB-201ENST00000374680 ALKBH1Q13686 389 aaKnown RBP15.46■□□□□ 0.06
RXRB-201ENST00000374680 SERTAD2Q14140 314 aa15.46■□□□□ 0.06
RXRB-201ENST00000374680 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.46■□□□□ 0.06
RXRB-201ENST00000374680 TSEN15Q8WW01 171 aaKnown RBP15.46■□□□□ 0.06
RXRB-201ENST00000374680 MAP6Q96JE9 813 aa15.46■□□□□ 0.06
RXRB-201ENST00000374680 SLX1AQ9BQ83 275 aa15.46■□□□□ 0.06
RXRB-201ENST00000374680 H0YIG0 161 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 UPK3AO75631 287 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 GATBO75879 557 aaKnown RBP15.45■□□□□ 0.06
RXRB-201ENST00000374680 IL33O95760 270 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 PNMTP11086 282 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 CCKBRP32239 447 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 Q6ZTK2 550 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 OVCH1Q7RTY7 1134 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 OR51D1Q8NGF3 324 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 ELOVL3Q9HB03 270 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 ING4Q9UNL4 249 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 MTCH2Q9Y6C9 303 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 ARID1AO14497 2285 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 XKRYO14609 159 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 SMAD9O15198 467 aaKnown RBP15.45■□□□□ 0.06
RXRB-201ENST00000374680 DDAH2O95865 285 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 HLA-DOBP13765 273 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 UBE2MP61081 183 aaKnown RBP15.45■□□□□ 0.06
RXRB-201ENST00000374680 GGTLC2Q14390 218 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 THOC7Q6I9Y2 204 aaKnown RBP15.45■□□□□ 0.06
RXRB-201ENST00000374680 OR7E24Q6IFN5 339 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 MAMSTRQ6ZN01 415 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 SLC16A9Q7RTY1 509 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 CMIPQ8IY22 773 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 SCMH1Q96GD3 660 aa15.45■□□□□ 0.06
RXRB-201ENST00000374680 DUSP15Q9H1R2 295 aaPredicted RBP15.45■□□□□ 0.06
RXRB-201ENST00000374680 EIF3KQ9UBQ5 218 aaKnown RBP15.45■□□□□ 0.06
RXRB-201ENST00000374680 SOX1O00570 391 aaPredicted RBP15.44■□□□□ 0.06
RXRB-201ENST00000374680 ITGA10O75578 1167 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 WNT11O96014 354 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 ASAH2BP0C7U1 165 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 ANXA7P20073 488 aaKnown RBP15.44■□□□□ 0.06
RXRB-201ENST00000374680 EFNB2P52799 333 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 GSG1Q2KHT4 349 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 UBE2NLQ5JXB2 153 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 SYT13Q7L8C5 426 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 OR8S1Q8NH09 359 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 ZNF721Q8TF20 911 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 S100A16Q96FQ6 103 aaKnown RBP15.44■□□□□ 0.06
RXRB-201ENST00000374680 ZDHHC12Q96GR4 267 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 DPCDQ9BVM2 203 aaPredicted RBP15.44■□□□□ 0.06
RXRB-201ENST00000374680 METTL17Q9H7H0 456 aaPredicted RBP15.44■□□□□ 0.06
RXRB-201ENST00000374680 ZMAT3Q9HA38 289 aaKnown RBP15.44■□□□□ 0.06
RXRB-201ENST00000374680 HRASLSQ9HDD0 168 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 VDAC3Q9Y277 283 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 NUBP2Q9Y5Y2 271 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 AIPO00170 330 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 RENP00797 406 aa15.44■□□□□ 0.06
RXRB-201ENST00000374680 TACSTD2P09758 323 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms