RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ITGB1BP2Q9UKP3 347 aa12.74□□□□□ -0.37
LDB3-204ENST00000372066 PPIEQ9UNP9 301 aaKnown RBP12.74□□□□□ -0.37
LDB3-204ENST00000372066 TP53TG5Q9Y2B4 290 aa12.74□□□□□ -0.37
LDB3-204ENST00000372066 ADAM18Q9Y3Q7 739 aa12.74□□□□□ -0.37
LDB3-204ENST00000372066 SIRT4Q9Y6E7 314 aaPredicted RBP12.74□□□□□ -0.37
LDB3-204ENST00000372066 COL12A1Q99715 3063 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 TRAV36DV7A0A075B6V5 113 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 LRRTM2O43300 516 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 HCRTR2O43614 444 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 TMEM127O75204 238 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 TFP02787 698 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 GYPBP06028 91 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 CXCR1P25024 350 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 MST1P26927 711 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 ABCD3P28288 659 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 P2RX1P51575 399 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 EFNA3P52797 238 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 ERVK-25P63136 954 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 CDK5R1Q15078 307 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 PRAMEF17Q5VTA0 474 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 GDPD3Q7L5L3 318 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 BPHLQ86WA6 291 aaPredicted RBP12.73□□□□□ -0.37
LDB3-204ENST00000372066 STT3BQ8TCJ2 826 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 PGLYRP3Q96LB9 341 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 SNX18Q96RF0 628 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 DCLRE1CQ96SD1 692 aaKnown RBP12.73□□□□□ -0.37
LDB3-204ENST00000372066 SOSTQ9BQB4 213 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 RNF32Q9H0A6 362 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 RARRES3Q9UL19 164 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 TBC1D24Q9ULP9 559 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 TRAV1-2A0A0B4J238 106 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 TEX13CA0A0J9YWL9 993 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 CDC14CA4D256 554 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 HSPB2A8KAH6 182 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 LRRN3E7EW58 273 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 SNPHO15079 494 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 FADS1O60427 444 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 SLC25A12O75746 678 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 ARL6IP5O75915 188 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 HLA-DQB1P01920 261 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 PYCR1P32322 319 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 HTR3AP46098 478 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 TGM4P49221 684 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 EVX1P49640 407 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 POLR2HP52434 150 aaKnown RBP12.73□□□□□ -0.37
LDB3-204ENST00000372066 SUMO3P55854 103 aaPredicted RBP12.73□□□□□ -0.37
LDB3-204ENST00000372066 OR12D2P58182 307 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 SLC26A5P58743 744 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 CTXN1P60606 82 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 EGR4Q05215 589 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 HSPB2Q16082 182 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 NKAIN1Q4KMZ8 207 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 SLC6A19Q695T7 634 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 DESI1Q6ICB0 168 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 LEG1Q6P5S2 330 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 KCTD20Q7Z5Y7 419 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 PRR22Q8IZ63 422 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 OR6S1Q8NH40 331 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 MOSPD2Q8NHP6 518 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 NUBPLQ8TB37 319 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 ABHD4Q8TB40 342 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 RPS4Y2Q8TD47 263 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 SNX33Q8WV41 574 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 RASD2Q96D21 266 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 SLC22A4Q9H015 551 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.73□□□□□ -0.37
LDB3-204ENST00000372066 KLHL1Q9NR64 748 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 C14orf119Q9NWQ9 140 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 CTSFQ9UBX1 484 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 PADI1Q9ULC6 663 aa12.73□□□□□ -0.37
LDB3-204ENST00000372066 PTPN13Q12923 2485 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 SEC16AO15027 2179 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 OR6C68A6NDL8 312 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 BLOC1S5-TXNDC5H3BN57 136 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 K7EM74 188 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 RENP00797 406 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 FGF5P12034 268 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 NAGAP17050 411 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 EVI2BP34910 448 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 AQP2P41181 271 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 CENPAP49450 140 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 SIRPAP78324 504 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 SLC3A1Q07837 685 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 ASB18Q6ZVZ8 466 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 SLC16A9Q7RTY1 509 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
LDB3-204ENST00000372066 LRRC28Q86X40 367 aaPredicted RBP12.72□□□□□ -0.37
LDB3-204ENST00000372066 PPP1R3BQ86XI6 285 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 ZBTB8BQ8NAP8 495 aaPredicted RBP12.72□□□□□ -0.37
LDB3-204ENST00000372066 OR2T4Q8NH00 348 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 OR8K3Q8NH51 312 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 STK35Q8TDR2 534 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 THAP4Q8WY91 577 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 PELI1Q96FA3 418 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 MOGAT1Q96PD6 335 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 LPAR4Q99677 370 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 ALG12Q9BV10 488 aa12.72□□□□□ -0.37
LDB3-204ENST00000372066 COMMD3Q9UBI1 195 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms