RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 F13BP05160 661 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 MGMTP16455 207 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 IMPA1P29218 277 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 RAB28P51157 221 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 LCN6P62502 163 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 SLC25A35Q3KQZ1 300 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 DBX2Q6ZNG2 339 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 GMLQ99445 158 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 EDEM2Q9BV94 578 aa11.75□□□□□ -0.53
GPC4-201ENST00000370828 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
GPC4-201ENST00000370828 LNP1A1A4G5 178 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 NME2P1O60361 137 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 SERPINA2P20848 420 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 FPR3P25089 353 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 RAB7AP51149 207 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 ALKBH1Q13686 389 aaKnown RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 LIPNQ5VXI9 398 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 C9orf62Q8N4C0 152 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 ZNF511Q8NB15 262 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 HAVCR2Q8TDQ0 301 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 IRF7Q92985 503 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 ULBP3Q9BZM4 244 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 NMNAT2Q9BZQ4 307 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 ZDHHC5Q9C0B5 715 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 PLEKHJ1Q9NW61 149 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 PRODH2Q9UF12 536 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 GAB2Q9UQC2 676 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 TMEM210A6NLX4 147 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 HTR2CP28335 458 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 ACSM1Q08AH1 577 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 HLXQ14774 488 aaPredicted RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 C4orf17Q53FE4 359 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 SFRP5Q5T4F7 317 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 Q6ZTK2 550 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 MMABQ96EY8 250 aaPredicted RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 SELENOIQ9C0D9 397 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 METTL9Q9H1A3 318 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 PRO1933Q9H354 126 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 A4GALTQ9NPC4 353 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 NAV1Q8NEY1 1877 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 MEIKINA0A087WXM9 373 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 B4DGG1 531 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 UMAD1C9J7I0 102 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 UPK1AO00322 258 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 NSA2O95478 260 aaKnown RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 SNCAP37840 140 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 RAP1AP62834 184 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 INSL4Q14641 139 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 IAH1Q2TAA2 248 aaPredicted RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 LCTLQ6UWM7 567 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 SLCO4C1Q6ZQN7 724 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 MAMDC2Q7Z304 686 aaPredicted RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 GDF7Q7Z4P5 450 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 FAM3DQ96BQ1 224 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 ORAI1Q96D31 301 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 RNF170Q96K19 258 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 ALG12Q9BV10 488 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 RGPD2P0DJD1 1756 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 SLC31A2O15432 143 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 PRKRAO75569 313 aaKnown RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 C1orf105O95561 183 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 MT-CO2P00403 227 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 SFTPCP11686 197 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 MRPS34P82930 218 aaKnown RBP11.74□□□□□ -0.53
GPC4-201ENST00000370828 LINC00303Q3SY05 128 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 TCTN3Q6NUS6 607 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 PLPP7Q8NBV4 271 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 TEAD3Q99594 435 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 SPIN2AQ99865 258 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 SPIN2BQ9BPZ2 258 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 ANKRD19PQ9H560 264 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 HRASLS2Q9NWW9 162 aa11.74□□□□□ -0.53
GPC4-201ENST00000370828 OR6C76A6NM76 312 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 OR2T1O43869 369 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 SLC16A7O60669 478 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 HOXA9P31269 272 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 FHITP49789 147 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 CAMK2DQ13557 499 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 KLHDC9Q8NEP7 349 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 GAS2L1Q99501 681 aaPredicted RBP11.73□□□□□ -0.53
GPC4-201ENST00000370828 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
GPC4-201ENST00000370828 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.73□□□□□ -0.53
GPC4-201ENST00000370828 ETV7Q9Y603 341 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 KIF13AQ9H1H9 1805 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 RFX2P48378 723 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 EXOSC7Q15024 291 aaKnown RBP11.73□□□□□ -0.53
GPC4-201ENST00000370828 TEAD2Q15562 447 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 CCDC71LQ8N9Z2 235 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 SGIP1Q9BQI5 828 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 ZDHHC4Q9NPG8 344 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 SCML1Q9UN30 329 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 M0QZQ0 153 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 FOXE1O00358 373 aaPredicted RBP11.73□□□□□ -0.53
GPC4-201ENST00000370828 LDB3O75112 727 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 PMP2P02689 132 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 MMP2P08253 660 aa11.73□□□□□ -0.53
GPC4-201ENST00000370828 BMI1P35226 326 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms