RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ELK4P28324 431 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 CDH12P55289 794 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 SPIBQ01892 262 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 MED21Q13503 144 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 RAB35Q15286 201 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 PDZK1Q5T2W1 519 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 CYB5R2Q6BCY4 276 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 Q6ZT83 130 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 FCRLAQ7L513 359 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 ATG4DQ86TL0 474 aaPredicted RBP13.3□□□□□ -0.28
RPF1-202ENST00000370656 SLC43A2Q8N370 569 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 DHRSXQ8N5I4 330 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 GATSQ8NAP1 163 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 OR4C3Q8NH37 302 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 B4GALNT2Q8NHY0 566 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 SH3YL1Q96HL8 342 aaPredicted RBP13.3□□□□□ -0.28
RPF1-202ENST00000370656 NPAS1Q99742 590 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 ADI1Q9BV57 179 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 C19orf24Q9BVV8 132 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 RLIMQ9NVW2 624 aa13.3□□□□□ -0.28
RPF1-202ENST00000370656 NPIPA5A0A0B4J1W7 369 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 SH3PXD2BA1X283 911 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 SERINC4A6NH21 518 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 ELOA3DA6NLF2 546 aaPredicted RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 CLDN24A6NM45 220 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 SHISA9B4DS77 424 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 NPIPA7E9PJI5 369 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 FAAHO00519 579 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 ABCD4O14678 606 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 RAMP1O60894 148 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 LYPD3O95274 346 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 NTN1O95631 604 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 SNAP29O95721 258 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 NPIPA8P0DM63 369 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 MYF6P23409 242 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 CAPGP40121 348 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 ACAA2P42765 397 aaKnown RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 YAP1P46937 504 aaKnown RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 RAD23AP54725 363 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 RGS8P57771 180 aaPredicted RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 PIN1Q13526 163 aaPredicted RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 CD300LDQ6UXZ3 194 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 DEF8Q6ZN54 512 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 HMGN2P46Q86SG4 172 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 P2RY8Q86VZ1 359 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 ZNF440Q8IYI8 595 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 LSMEM1Q8N8F7 131 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 ELOA3Q8NG57 546 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 VANGL1Q8TAA9 524 aaPredicted RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 SLC7A13Q8TCU3 470 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 CACNG6Q9BXT2 260 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 EXOSC3Q9NQT5 275 aaKnown RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 CBLN4Q9NTU7 201 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 KLHL9Q9P2J3 617 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 TESQ9UGI8 421 aaKnown RBP13.29□□□□□ -0.28
RPF1-202ENST00000370656 POU2F3Q9UKI9 436 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 MGAT4BQ9UQ53 548 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 SLC35A3Q9Y2D2 325 aa13.29□□□□□ -0.28
RPF1-202ENST00000370656 A0A096LNT2 108 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 TRBV4-1A0A0J9YWV2 114 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 AP3D1O14617 1153 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 CYP7B1O75881 506 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 LYZL6O75951 148 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 CCNB2O95067 398 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 NUDT14O95848 222 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 THY1P04216 161 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 LINGO3P0C6S8 592 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 SRD5A1P18405 259 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 RPS6KA3P51812 740 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 ST3GAL3Q11203 375 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 ENTPD8Q5MY95 495 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 TIMM23BQ5SRD1 257 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 TTC23Q5W5X9 447 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 SEZ6L2Q6UXD5 910 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 TMEM108Q6UXF1 575 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 RANBP3LQ86VV4 465 aaPredicted RBP13.28□□□□□ -0.28
RPF1-202ENST00000370656 FBXL14Q8N1E6 418 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 PARP8Q8N3A8 854 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 ZNF527Q8NB42 609 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 OR10G2Q8NGC3 310 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 POC1BQ8TC44 478 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 FAM168AQ92567 244 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 CNOT9Q92600 299 aaKnown RBP13.28□□□□□ -0.28
RPF1-202ENST00000370656 MBOAT4Q96T53 435 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 FEVQ99581 238 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 MCHR1Q99705 422 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 FNDC11Q9BVV2 318 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 GABARAPL3Q9BY60 117 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 SRXN1Q9BYN0 137 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 TOR3AQ9H497 397 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 FAM118AQ9NWS6 357 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 HEATR1Q9H583 2144 aaKnown RBP13.28□□□□□ -0.28
RPF1-202ENST00000370656 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
RPF1-202ENST00000370656 ZNF814B7Z6K7 855 aa13.27□□□□□ -0.29
RPF1-202ENST00000370656 FRS3O43559 492 aa13.27□□□□□ -0.29
RPF1-202ENST00000370656 LMX1BO60663 402 aa13.27□□□□□ -0.29
RPF1-202ENST00000370656 BCAS1O75363 584 aaPredicted RBP13.27□□□□□ -0.29
RPF1-202ENST00000370656 CSF3P09919 207 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms