RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 NRG3P56975 720 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 TRA2BP62995 288 aaKnown RBP13.44□□□□□ -0.26
LMO4-201ENST00000370542 TPBGQ13641 420 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 SCARB2Q14108 478 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 CTRB2Q6GPI1 263 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 FAM122CQ6P4D5 195 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 TMEM64Q6YI46 380 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 ZNF730Q6ZMV8 503 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 PHC2Q8IXK0 858 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 MTERF3Q96E29 417 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 APIPQ96GX9 242 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 NIPSNAP1Q9BPW8 284 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 ZNF559Q9BR84 538 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 TMEM43Q9BTV4 400 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 NXF5Q9H1B4 397 aaKnown RBP13.44□□□□□ -0.26
LMO4-201ENST00000370542 GSX1Q9H4S2 264 aaPredicted RBP13.44□□□□□ -0.26
LMO4-201ENST00000370542 ACER3Q9NUN7 267 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 MRPS18AQ9NVS2 196 aaKnown RBP13.44□□□□□ -0.26
LMO4-201ENST00000370542 MAT2BQ9NZL9 334 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 ELF5Q9UKW6 265 aaPredicted RBP13.44□□□□□ -0.26
LMO4-201ENST00000370542 ACANP16112 2415 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 HRNRQ86YZ3 2850 aaPredicted RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 A0A1B0GVI7 797 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 TMEM129A0AVI4 362 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 HSPB2A8KAH6 182 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 INMT-MINDY4F8WBC2 141 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 TO15178 435 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 TNFRSF21O75509 655 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 OR7A10O76100 309 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 PEPDP12955 493 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 TACR1P25103 407 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 AZGP1P25311 298 aaKnown RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 GDF1P27539 372 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 TALDO1P37837 337 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 PTGDSP41222 190 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 HNRNPA0Q13151 305 aaKnown RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 HEPACAMQ14CZ8 416 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 HSPB2Q16082 182 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 ACSF3Q4G176 576 aaPredicted RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 HLA-DQA1Q5Y7H0 255 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 ARSKQ6UWY0 536 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 TSEN54Q7Z6J9 526 aaKnown RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 TGIF2LYQ8IUE0 185 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 AQP11Q8NBQ7 271 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 NAXEQ8NCW5 288 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 HGDQ93099 445 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 C11orf24Q96F05 449 aaPredicted RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 GNRHR2Q96P88 292 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 PRRG3Q9BZD7 231 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 EXO5Q9H790 373 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 ZNF275Q9NSD4 429 aaPredicted RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 EMC3Q9P0I2 261 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 ZNF629Q9UEG4 869 aaPredicted RBP13.43□□□□□ -0.26
LMO4-201ENST00000370542 HSPB11Q9Y547 144 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 VPS13CQ709C8 3753 aa13.43□□□□□ -0.26
LMO4-201ENST00000370542 A0A0X1KG70 313 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 TRDV1A0A1B0GX56 115 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 CD8B2A6NJW9 211 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 KDM4EB2RXH2 506 aaPredicted RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 CTAG2O75638 210 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 PPM1BO75688 479 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 TSPAN9O75954 239 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 TPPPO94811 219 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 LRATO95237 230 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 CBX7O95931 251 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 ARSBP15848 533 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 CSNK2A2P19784 350 aaPredicted RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 NT5EP21589 574 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 IL32P24001 234 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 DUSP2Q05923 314 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 SNTA1Q13424 505 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 TP53BP2Q13625 1128 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 CEBPEQ15744 281 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 CLLU1Q5K131 121 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 NSUN5P2Q63ZY6 315 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 FAM111BQ6SJ93 734 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 KLHL17Q6TDP4 642 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 CD300LDQ6UXZ3 194 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 NUP54Q7Z3B4 507 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 PM20D2Q8IYS1 436 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 Q8N402 240 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 RELL2Q8NC24 303 aaPredicted RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 RNF138Q8WVD3 245 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 UFD1Q92890 307 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 MAP6Q96JE9 813 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 LCORQ96JN0 433 aaPredicted RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 JSRP1Q96MG2 331 aaPredicted RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 KCNJ15Q99712 375 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 POLDIP3Q9BY77 421 aaKnown RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 PPP1R3EQ9H7J1 279 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 LIN7BQ9HAP6 207 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 FGF20Q9NP95 211 aaPredicted RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 COPZ2Q9P299 210 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 RABL2AQ9UBK7 228 aaPredicted RBP13.42□□□□□ -0.26
LMO4-201ENST00000370542 GLS2Q9UI32 602 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 RABL2BQ9UNT1 228 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 FKBP7Q9Y680 259 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 MED12Q93074 2177 aa13.42□□□□□ -0.26
LMO4-201ENST00000370542 A0A0B4J293 547 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms