RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 LSM11P83369 360 aaKnown RBP eCLIP17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 SLC35D2Q76EJ3 337 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 OFCC1Q8IZS5 231 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 LZICQ8WZA0 190 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 SLC38A2Q96QD8 506 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 SEPHS2Q99611 448 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 B3GNT2Q9NY97 397 aa17.89■□□□□ 0.45
SMNDC1-201ENST00000369592 NSD1Q96L73 2696 aaPredicted RBP17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 C11orf98E9PRG8 122 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 M0R3G1 203 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 FUT1P19526 365 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 AHCYP23526 432 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 TTKP33981 857 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 BIDP55957 195 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 IL1RL1Q01638 556 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 ST3GAL3Q11203 375 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 CAMK2DQ13557 499 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 SLC22A25Q6T423 547 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 KLHL24Q6TFL4 600 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 DNM1P46Q6ZS02 220 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 ANKS4BQ8N8V4 417 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 ADAD1Q96M93 576 aaKnown RBP17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 ZNF75AQ96N20 296 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 ARL2BPQ9Y2Y0 163 aa17.88■□□□□ 0.45
SMNDC1-201ENST00000369592 RTTNQ86VV8 2226 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 HTR3EA5X5Y0 456 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 SERPINA1P01009 418 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 CBR1P16152 277 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 TUBA1BP68363 451 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 TUBA4AP68366 448 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 RPL18Q07020 188 aaKnown RBP17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 FHL1Q13642 323 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 HIST3H3Q16695 136 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 CARD17Q5XLA6 110 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 ZNF544Q6NX49 715 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 LRFN4Q6PJG9 635 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 TUBA1AQ71U36 451 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 MYPOPQ86VE0 399 aaPredicted RBP17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 CCDC36Q8IYA8 594 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 CIARTQ8N365 385 aaPredicted RBP17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 GEMIN6Q8WXD5 167 aaKnown RBP17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 SGTBQ96EQ0 304 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 C18orf12Q96KH6 178 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 COX4I2Q96KJ9 171 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 Q96MF0 132 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 KCTD14Q9BQ13 255 aaPredicted RBP17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 KATNB1Q9BVA0 655 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 MRPL13Q9BYD1 178 aaKnown RBP17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 SEC61A2Q9H9S3 476 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 MOV10Q9HCE1 1003 aaKnown RBP17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 SPAG4Q9NPE6 437 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 ARL8BQ9NVJ2 186 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 ZNF224Q9NZL3 707 aa17.87■□□□□ 0.45
SMNDC1-201ENST00000369592 ZNF726A6NNF4 738 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 ATP6V1G2-DDX39BF2Z307 99 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 J3KTA2 159 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 DYNC1I1O14576 645 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 OR6A2O95222 327 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 IFNW1P05000 195 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 CECR9P0C854 216 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 PGA4P0DJD7 388 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 PGA3P0DJD8 388 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 CDKN1AP38936 164 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 ATP5J2P56134 94 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 UBE2NP61088 152 aaKnown RBP17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 IFI44LQ53G44 452 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 NANOGNBQ7Z5D8 188 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 SLC25A44Q96H78 314 aaPredicted RBP17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 HSH2DQ96JZ2 352 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 GSX1Q9H4S2 264 aaPredicted RBP17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 CBLN4Q9NTU7 201 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 FAIMQ9NVQ4 179 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 GLTPQ9NZD2 209 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 CD300AQ9UGN4 299 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 MOKQ9UQ07 419 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 MED31Q9Y3C7 131 aa17.86■□□□□ 0.45
SMNDC1-201ENST00000369592 NPIPB13A6NJU9 1138 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 NPIPB4C9JG80 1138 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 GSTA4O15217 222 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 RNF13O43567 381 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 PIP5K1CO60331 668 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 IGHV4-39P01824 125 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 HIST1H2ABP04908 130 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 NCK1P16333 377 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 AQP2P41181 271 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 CSNK1A1P48729 337 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 ZNF133P52736 654 aaPredicted RBP17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 NAAAQ02083 359 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 MST1LQ2TV78 715 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 IQCCQ4KMZ1 466 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 AGAP6Q5VW22 663 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 HIST3H2AQ7L7L0 130 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 DEPDC4Q8N2C3 294 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 HIST1H2ACQ93077 130 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 C7orf34Q96L11 122 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 ULBP2Q9BZM5 246 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 B3GAT2Q9NPZ5 323 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 DCAF13Q9NV06 445 aaKnown RBP17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 HIF3AQ9Y2N7 669 aa17.85■□□□□ 0.45
SMNDC1-201ENST00000369592 TRIM64A6NGJ6 449 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms