RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SLC35F4A4IF30 521 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 AHRRA9YTQ3 701 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 XKRYO14609 159 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 IMPA2O14732 288 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF3P17036 446 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 GABRB1P18505 474 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CLDN17P56750 224 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CDK5R2Q13319 367 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ITGADQ13349 1161 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 POU4F3Q15319 338 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 SMN1Q16637 294 aaKnown RBP9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ADGRE4PQ86SQ3 457 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CD163Q86VB7 1156 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 JAZF1Q86VZ6 243 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CPOQ8IVL8 374 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 WDFY1Q8IWB7 410 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF519Q8TB69 540 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 TMEM163Q8TC26 289 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 MED20Q9H944 212 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 HINT3Q9NQE9 182 aaKnown RBP9.74□□□□□ -0.85
BRCC3-204ENST00000369462 KLHL9Q9P2J3 617 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CLEC4AQ9UMR7 237 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 KIAA1549Q9HCM3 1950 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 NPIPB13A6NJU9 1138 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 NPIPB4C9JG80 1138 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 MPZL2O60487 215 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 WBP4O75554 376 aaKnown RBP9.74□□□□□ -0.85
BRCC3-204ENST00000369462 IGHMP01871 453 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 PLBD1Q6P4A8 553 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 LEG1Q6P5S2 330 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 MCEMP1Q8IX19 187 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ZIC4Q8N9L1 334 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 SYT14Q8NB59 555 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 SLC37A3Q8NCC5 494 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 NPEPL1Q8NDH3 523 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CPT1CQ8TCG5 803 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ASB10Q8WXI3 467 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 DNAJC27Q9NZQ0 273 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 KLHL21Q9UJP4 597 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ING1Q9UK53 422 aaPredicted RBP9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF175Q9Y473 711 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 FLVCR1Q9Y5Y0 555 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 OR6C68A6NDL8 312 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ACVR2AP27037 513 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 SNRPGP62308 76 aaKnown RBP9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CAMK2DQ13557 499 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 C3P1Q6ZMU1 363 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 P4HA3Q7Z4N8 544 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 FAM26EQ8N5C1 309 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 APH1BQ8WW43 257 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 PTP4A1Q93096 173 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 HCAR1Q9BXC0 346 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 AMBNQ9NP70 447 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 CLCF1Q9UBD9 225 aa9.74□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF726A6NNF4 738 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 PRR23D1E9PI22 279 aaPredicted RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 TPD52L2O43399 206 aaKnown RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 ENTPD6O75354 484 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 PRR23D2P0DMB1 279 aaPredicted RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 PAICSP22234 425 aaKnown RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 FMO3P31513 532 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 NTF4P34130 210 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 NUDT6P53370 316 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 SLC16A1P53985 500 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 GUCA2AQ02747 115 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 RNPS1Q15287 305 aaKnown RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 ACSF3Q4G176 576 aaPredicted RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 CARD17Q5XLA6 110 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 GTF2IRD2BQ6EKJ0 949 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 LAIR2Q6ISS4 152 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 RPTNQ6XPR3 784 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 CXXC5Q7LFL8 322 aaKnown RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 GTF2IRD2Q86UP8 949 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 TUSC5Q8IXB3 177 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 ZNF786Q8N393 782 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 BBS1Q8NFJ9 593 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 OR9Q1Q8NGQ5 310 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 FBLIM1Q8WUP2 373 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 HDAC2Q92769 488 aaKnown RBP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 TSSK2Q96PF2 358 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 SYT4Q9H2B2 425 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 FN3KQ9H479 309 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 CLN6Q9NWW5 311 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 CFAP46Q8IYW2 2715 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 POLEQ07864 2286 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 PRSS37A4D1T9 235 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 A6NIZ1 184 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 FIGNL2A6NMB9 653 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 GPR171O14626 319 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 SLC19A2O60779 497 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 SMNDC1O75940 238 aaKnown RBP eCLIP9.73□□□□□ -0.85
BRCC3-204ENST00000369462 GYPBP06028 91 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 CLUP10909 449 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 FCGR2AP12318 317 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 EDN3P14138 238 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 GABRA1P14867 456 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 RAP1BP61224 184 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 RAP1AP62834 184 aa9.73□□□□□ -0.85
BRCC3-204ENST00000369462 C6orf141Q5SZD1 244 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms