RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ZNRF4Q8WWF5 429 aa21.36■■□□□ 1.01
SNX3-203ENST00000368979 CRELD1Q96HD1 420 aa21.36■■□□□ 1.01
SNX3-203ENST00000368979 OXGR1Q96P68 337 aa21.36■■□□□ 1.01
SNX3-203ENST00000368979 SRXN1Q9BYN0 137 aa21.36■■□□□ 1.01
SNX3-203ENST00000368979 VSX1Q9NZR4 365 aaPredicted RBP21.36■■□□□ 1.01
SNX3-203ENST00000368979 NPIPA1Q9UND3 350 aa21.36■■□□□ 1.01
SNX3-203ENST00000368979 RASD1Q9Y272 281 aa21.36■■□□□ 1.01
SNX3-203ENST00000368979 PRSS37A4D1T9 235 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 A6NIZ1 184 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 K7ENP7 123 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 BCL10O95999 233 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 CLDN15P56746 228 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 RAC3P60763 192 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 RAP1BP61224 184 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 RAP1AP62834 184 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 RNFT1Q5M7Z0 435 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 LCN1P1Q5VSP4 162 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 INO80CQ6PI98 192 aaPredicted RBP21.35■■□□□ 1.01
SNX3-203ENST00000368979 ZADH2Q8N4Q0 377 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 OR2V1Q8NHB1 315 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 DCBLD2Q96PD2 775 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 NAA11Q9BSU3 229 aaPredicted RBP21.35■■□□□ 1.01
SNX3-203ENST00000368979 ZDHHC11Q9H8X9 412 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 ADGRL4Q9HBW9 690 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 TNFRSF10DQ9UBN6 386 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 CLEC2DQ9UHP7 191 aa21.35■■□□□ 1.01
SNX3-203ENST00000368979 EXOSC1Q9Y3B2 195 aaKnown RBP21.35■■□□□ 1.01
SNX3-203ENST00000368979 TRAF3IP2O43734 574 aaPredicted RBP21.34■■□□□ 1.01
SNX3-203ENST00000368979 FREM3P0C091 2139 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 LHX2P50458 406 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 POU4F2Q12837 409 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 SLC10A1Q14973 349 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 PON3Q15166 354 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 LINC01590Q5TEZ4 76 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 HBMQ6B0K9 141 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 TMEM225Q6GV28 225 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 PM20D2Q8IYS1 436 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 SYT4Q9H2B2 425 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 MED29Q9NX70 200 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 CEPT1Q9Y6K0 416 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 CELSR3Q9NYQ7 3312 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 DCTN6O00399 190 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 GLCEO94923 617 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 SBK2P0C263 348 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 ATP6V1E1P36543 226 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 ETV1P50549 477 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 RUNX1T1Q06455 604 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 ZNF367Q7RTV3 350 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 WDFY1Q8IWB7 410 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 UBQLNLQ8IYU4 475 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 NANOGP1Q8N7R0 232 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 OR51L1Q8NGJ5 315 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 OR2T4Q8NH00 348 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 ZMYND19Q96E35 227 aaPredicted RBP21.34■■□□□ 1.01
SNX3-203ENST00000368979 ZHX1-C8orf76Q96EF9 292 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 TXNDC15Q96J42 360 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 TSSK2Q96PF2 358 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 MOKQ9UQ07 419 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 ERGIC3Q9Y282 383 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 LSM2Q9Y333 95 aaKnown RBP21.34■■□□□ 1.01
SNX3-203ENST00000368979 KIAA1549Q9HCM3 1950 aa21.34■■□□□ 1.01
SNX3-203ENST00000368979 ZFHX4Q86UP3 3567 aa21.33■■□□□ 1.01
SNX3-203ENST00000368979 SMAD9O15198 467 aaKnown RBP21.33■■□□□ 1
SNX3-203ENST00000368979 VAMP5O95183 116 aa21.33■■□□□ 1
SNX3-203ENST00000368979 ZNF708P17019 499 aa21.33■■□□□ 1
SNX3-203ENST00000368979 MYL12AP19105 171 aa21.33■■□□□ 1
SNX3-203ENST00000368979 CLDN18P56856 261 aa21.33■■□□□ 1
SNX3-203ENST00000368979 CARD18P57730 90 aa21.33■■□□□ 1
SNX3-203ENST00000368979 PMP22Q01453 160 aa21.33■■□□□ 1
SNX3-203ENST00000368979 POU4F3Q15319 338 aa21.33■■□□□ 1
SNX3-203ENST00000368979 EEF1A1P5Q5VTE0 462 aa21.33■■□□□ 1
SNX3-203ENST00000368979 GPAT4Q86UL3 456 aa21.33■■□□□ 1
SNX3-203ENST00000368979 OR6V1Q8N148 313 aa21.33■■□□□ 1
SNX3-203ENST00000368979 PROKR2Q8NFJ6 384 aa21.33■■□□□ 1
SNX3-203ENST00000368979 OR10D3Q8NH80 312 aa21.33■■□□□ 1
SNX3-203ENST00000368979 UCN2Q96RP3 112 aa21.33■■□□□ 1
SNX3-203ENST00000368979 KCNK17Q96T54 332 aa21.33■■□□□ 1
SNX3-203ENST00000368979 ZNF649Q9BS31 505 aa21.33■■□□□ 1
SNX3-203ENST00000368979 MND1Q9BWT6 205 aa21.33■■□□□ 1
SNX3-203ENST00000368979 LIPGQ9Y5X9 500 aa21.33■■□□□ 1
SNX3-203ENST00000368979 FKBP7Q9Y680 259 aa21.33■■□□□ 1
SNX3-203ENST00000368979 IGHV3-15A0A0B4J1V0 119 aa21.32■■□□□ 1
SNX3-203ENST00000368979 MED19A0JLT2 244 aaPredicted RBP21.32■■□□□ 1
SNX3-203ENST00000368979 SLC22A23A1A5C7 686 aa21.32■■□□□ 1
SNX3-203ENST00000368979 H3BSA7 217 aa21.32■■□□□ 1
SNX3-203ENST00000368979 CXCL13O43927 109 aa21.32■■□□□ 1
SNX3-203ENST00000368979 PDGFAP04085 211 aa21.32■■□□□ 1
SNX3-203ENST00000368979 LIMS3P0CW19 117 aa21.32■■□□□ 1
SNX3-203ENST00000368979 LIMS4P0CW20 117 aa21.32■■□□□ 1
SNX3-203ENST00000368979 PSMB9P28065 219 aa21.32■■□□□ 1
SNX3-203ENST00000368979 PYCR1P32322 319 aa21.32■■□□□ 1
SNX3-203ENST00000368979 ZBTB46Q86UZ6 589 aa21.32■■□□□ 1
SNX3-203ENST00000368979 POMGNT2Q8NAT1 580 aa21.32■■□□□ 1
SNX3-203ENST00000368979 OR5M11Q96RB7 305 aa21.32■■□□□ 1
SNX3-203ENST00000368979 ALG12Q9BV10 488 aa21.32■■□□□ 1
SNX3-203ENST00000368979 TSPAN10Q9H1Z9 355 aaPredicted RBP21.32■■□□□ 1
SNX3-203ENST00000368979 KLHL13Q9P2N7 655 aa21.32■■□□□ 1
SNX3-203ENST00000368979 MED12Q93074 2177 aa21.31■■□□□ 1
SNX3-203ENST00000368979 TMEM129A0AVI4 362 aa21.31■■□□□ 1
SNX3-203ENST00000368979 MYL12BO14950 172 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms