RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 RAB18Q9NP72 206 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 GPR55Q9Y2T6 319 aaPredicted RBP15.53■□□□□ 0.08
NID1-202ENST00000366595 MBP02144 154 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 SHC1P29353 583 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 LRRC26Q2I0M4 334 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 DPY19L2P2Q6ZN68 376 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 RNF175Q8N4F7 328 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 ZNF561Q8N587 486 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 CELF2-AS1Q8N7Q2 184 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 SLC39A13Q96H72 371 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 SLC35E1Q96K37 410 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 APOOQ9BUR5 198 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 CACFD1Q9UGQ2 172 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 TMEM72A0PK05 275 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 CRYM-AS1A6NIL9 109 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 ENSAO43768 121 aaKnown RBP15.53■□□□□ 0.08
NID1-202ENST00000366595 MMP7P09237 267 aaPredicted RBP15.53■□□□□ 0.08
NID1-202ENST00000366595 ZNF93P35789 620 aaPredicted RBP15.53■□□□□ 0.08
NID1-202ENST00000366595 PGGT1BP53609 377 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 PTTG1IPP53801 180 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 TIMM29Q9BSF4 260 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 C12orf10Q9HB07 376 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 GOLT1BQ9Y3E0 138 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 UMAD1C9J7I0 102 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 ICAM2P13598 275 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 CALCRP30988 508 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 NKX2-1P43699 371 aaPredicted RBP15.53■□□□□ 0.08
NID1-202ENST00000366595 MPPED2Q15777 294 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 ESPNLQ6ZVH7 1005 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 CDH26Q8IXH8 852 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 OR1M1Q8NGA1 313 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 CPEB1Q9BZB8 566 aaKnown RBP15.53■□□□□ 0.08
NID1-202ENST00000366595 NKX2-4Q9H2Z4 354 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 TAS2R5Q9NYW4 299 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 URGCP-MRPS24S4R325 110 aa15.53■□□□□ 0.08
NID1-202ENST00000366595 TRAV36DV7A0A075B6V5 113 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 SIX6O95475 246 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 CALCBP10092 127 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 POU3F3P20264 500 aaPredicted RBP15.52■□□□□ 0.08
NID1-202ENST00000366595 SMN1Q16637 294 aaKnown RBP15.52■□□□□ 0.08
NID1-202ENST00000366595 CDONQ4KMG0 1287 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 MARCH8Q5T0T0 291 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 MRPL2Q5T653 305 aaKnown RBP15.52■□□□□ 0.08
NID1-202ENST00000366595 OR51I2Q9H344 312 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 ZNF355PQ9NSJ1 428 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 GASTP01350 101 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 PAX6P26367 422 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 CSNK1DP48730 415 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 HYAL4Q2M3T9 481 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 ZNF574Q6ZN55 896 aaPredicted RBP15.52■□□□□ 0.08
NID1-202ENST00000366595 OR51A2Q8NGJ7 313 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 SPACA1Q9HBV2 294 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 MTCH1Q9NZJ7 389 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 ZMAT5Q9UDW3 170 aaKnown RBP15.52■□□□□ 0.08
NID1-202ENST00000366595 B3GALT5Q9Y2C3 310 aa15.52■□□□□ 0.08
NID1-202ENST00000366595 ADGRB1O14514 1584 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 HOXC13P31276 330 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 ASAH1Q13510 395 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 ARHGAP11BQ3KRB8 267 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 OVCH1Q7RTY7 1134 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 TCTE3Q8IZS6 198 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 TSLPQ969D9 159 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 SETD1AO15047 1707 aaKnown RBP15.52■□□□□ 0.07
NID1-202ENST00000366595 IGFBP1P08833 259 aaPredicted RBP15.52■□□□□ 0.07
NID1-202ENST00000366595 DAPP51397 102 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 HOXC5Q00444 222 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 SYPL1Q16563 259 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 ZNF626Q68DY1 528 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 ACOT7LQ6ZUV0 252 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 NAXDQ8IW45 347 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 GAREM1Q9H706 876 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 V9GYS6 101 aa15.52■□□□□ 0.07
NID1-202ENST00000366595 AP1G1O43747 822 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 CD70P32970 193 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
NID1-202ENST00000366595 CDK5Q00535 292 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 SLC17A1Q14916 467 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 SLC5A12Q1EHB4 618 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 COL13A1Q5TAT6 717 aaPredicted RBP15.51■□□□□ 0.07
NID1-202ENST00000366595 SOX7Q9BT81 388 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 OPA3Q9H6K4 179 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 TRBV4-1A0A0J9YWV2 114 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 FAM155AB1AL88 458 aaPredicted RBP15.51■□□□□ 0.07
NID1-202ENST00000366595 CSF2RAP15509 400 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 RAB13P51153 203 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 HNRNPA3P51991 378 aaKnown RBP15.51■□□□□ 0.07
NID1-202ENST00000366595 ZNF140P52738 457 aaPredicted RBP15.51■□□□□ 0.07
NID1-202ENST00000366595 AAED1Q7RTV5 226 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 SLC35B4Q969S0 331 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 AK3Q9UIJ7 227 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 TIMM8AO60220 97 aaPredicted RBP15.51■□□□□ 0.07
NID1-202ENST00000366595 SUSD5O60279 629 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 EIF1BO60739 113 aaKnown RBP15.51■□□□□ 0.07
NID1-202ENST00000366595 PRICKLE2Q7Z3G6 844 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 ADGRG3Q86Y34 549 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 BRI3BPQ8WY22 251 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 NDFIP1Q9BT67 221 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 BARHL1Q9BZE3 327 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 TREX1Q9NSU2 369 aa15.51■□□□□ 0.07
NID1-202ENST00000366595 TMEM235A6NFC5 223 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms