RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SELENOIQ9C0D9 397 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 ACKR4Q9NPB9 350 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 KCNJ16Q9NPI9 418 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 WBP1LQ9NX94 342 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SNNO75324 88 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 NSA2O95478 260 aaKnown RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 BLVRBP30043 206 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-203ENST00000361654 PRKAR1BP31321 381 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 CSN1S1P47710 185 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 WNT7BP56706 349 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 HBA1P69905 142 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 CSNK1G2P78368 415 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 AFMIDQ63HM1 303 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 OVCH1Q7RTY7 1134 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 SLC22A24Q8N4F4 322 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 CA5BP1Q8WTZ4 195 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 CSF3RQ99062 836 aa10.11□□□□□ -0.79
CLIP1-203ENST00000361654 IGHV3-20A0A0C4DH32 117 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 SFTPCP11686 197 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 BMP2P12643 396 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 IL7P13232 177 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF133P52736 654 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-203ENST00000361654 MFGE8Q08431 387 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-203ENST00000361654 HLA-BQ31612 363 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 UBTD2Q8WUN7 234 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 SLC35A4Q96G79 324 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 ISYNA1Q9NPH2 558 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 A0A1B0GWA3 101 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 SLC22A20A6NK97 555 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 METTL12A8MUP2 240 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 CD14P08571 375 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 ACP2P11117 423 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 MBOAT2Q6ZWT7 520 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 SLC7A5P1Q8MH63 180 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 KISS1RQ969F8 398 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-203ENST00000361654 BSCL2Q96G97 398 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-203ENST00000361654 GORASP2Q9H8Y8 452 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 VAPAQ9P0L0 249 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 NLKQ9UBE8 527 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 MUTYHQ9UIF7 546 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 LTN1O94822 1766 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 LYRM1O43325 122 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 HLA-DMAP28067 261 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 SRP9P49458 86 aaKnown RBP10.1□□□□□ -0.79
CLIP1-203ENST00000361654 ATPAF1Q5TC12 328 aaPredicted RBP10.1□□□□□ -0.79
CLIP1-203ENST00000361654 C18orf63Q68DL7 685 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 OR51A2Q8NGJ7 313 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 MRGPRX1Q96LB2 322 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 HYLS1Q96M11 299 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 CMTM3Q96MX0 182 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 OR51B4Q9Y5P0 310 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 MYH15Q9Y2K3 1946 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 KIR2DS1A0A191URI9 304 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 CLDN1O95832 211 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 GLAP06280 429 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 OR8G3PP0DMU2 310 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 TPT1P13693 172 aaKnown RBP10.1□□□□□ -0.79
CLIP1-203ENST00000361654 KIR2DS4P43632 304 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 CAPZBP47756 277 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 VEGFCP49767 419 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 FOXA1P55317 472 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 KIR2DS1Q14954 304 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 CST9LP1Q5W188 147 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 SERPINA12Q8IW75 414 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 LILRA2Q8N149 483 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 DEFB124Q8NES8 71 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 CHRNA9Q9UGM1 479 aa10.1□□□□□ -0.79
CLIP1-203ENST00000361654 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 TSPAN11A1L157 253 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 TNFSF12O43508 249 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 MGAT3Q09327 533 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 Q6ZTK2 550 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 SEMA6DQ8NFY4 1073 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ZNF419Q96HQ0 510 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ATOH8Q96SQ7 321 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 S1PR3Q99500 378 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 C1QTNF6Q9BXI9 259 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 PLEKHF2Q9H8W4 249 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 NOX4Q9NPH5 578 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 SLC22A11Q9NSA0 550 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 CACNG2Q9Y698 323 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 LINC01387J3KSC0 135 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 GMDSO60547 372 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 HTR2CP28335 458 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 GABRA4P48169 554 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 LIM2P55344 173 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 CD163Q86VB7 1156 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 BPIFB2Q8N4F0 458 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 CRYGNQ8WXF5 182 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 TNFRSF13CQ96RJ3 184 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 SLC39A9Q9NUM3 307 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 A0A087WZY1 265 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 TMEM72A0PK05 275 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 SLCO2B1O94956 709 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 MAGEA6P43360 314 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 KRBOX4Q5JUW0 171 aa10.09□□□□□ -0.79
CLIP1-203ENST00000361654 PIWIL3Q7Z3Z3 882 aaKnown RBP10.09□□□□□ -0.79
CLIP1-203ENST00000361654 NAXDQ8IW45 347 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms