RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 SMIM4Q8WVI0 70 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 PLEKHB1Q9UF11 243 aaPredicted RBP12.87□□□□□ -0.35
SMC5-201ENST00000361138 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
SMC5-201ENST00000361138 SERPINA2P20848 420 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 ARRB1P49407 418 aaPredicted RBP12.87□□□□□ -0.35
SMC5-201ENST00000361138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.87□□□□□ -0.354e-6■■■■□ 20.5
SMC5-201ENST00000361138 NAA40Q86UY6 237 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 SLC38A6Q8IZM9 456 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 FAM213BQ8TBF2 198 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 RAB3CQ96E17 227 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 ZNF160Q9HCG1 818 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 ADAM10O14672 748 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 CNOT4O95628 575 aaKnown RBP12.87□□□□□ -0.35
SMC5-201ENST00000361138 GPM6BQ13491 265 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 FAM74A1Q5RGS3 127 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 GLYATL3Q5SZD4 288 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 TMEM88Q6PEY1 159 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 CAMKMTQ7Z624 323 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 OR2AK2Q8NG84 335 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 WFDC5Q8TCV5 224 aa12.87□□□□□ -0.35
SMC5-201ENST00000361138 TRAV1-2A0A0B4J238 106 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 CIB4A0PJX0 185 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 BCL6P41182 706 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 CX3CR1P49238 355 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 DSC1Q08554 894 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 OR7A5Q15622 319 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 HIST2H3PS2Q5TEC6 136 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 FRZBQ92765 325 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 C20orf24Q9BUV8 137 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 TMEM231Q9H6L2 316 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 MYH14Q7Z406 1995 aaKnown RBP12.86□□□□□ -0.35
SMC5-201ENST00000361138 TRBV5-4A0A0C4DH59 114 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 LRIT2A6NDA9 550 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 DPY19L4Q7Z388 723 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 GABRG1Q8N1C3 465 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 SMIM19Q96E16 107 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 GAS2L1Q99501 681 aaPredicted RBP12.86□□□□□ -0.35
SMC5-201ENST00000361138 RAB22AQ9UL26 194 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 SLC22A7Q9Y694 548 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 HNRNPA1L2Q32P51 320 aaKnown RBP12.86□□□□□ -0.35
SMC5-201ENST00000361138 FAM111BQ6SJ93 734 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 SLC22A25Q6T423 547 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 CMTM1Q8IZ96 169 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 OR56B1Q8NGI3 324 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 MYEOVQ96EZ4 313 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 GPR55Q9Y2T6 319 aaPredicted RBP12.86□□□□□ -0.35
SMC5-201ENST00000361138 ARFGEF1Q9Y6D6 1849 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 IFITM5A6NNB3 132 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 HEPACAM2A8MVW5 462 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 CHRM4P08173 479 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 P2RX1P51575 399 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 PDSS1Q5T2R2 415 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 WDR88Q6ZMY6 472 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 ENTPD2Q9Y5L3 495 aa12.86□□□□□ -0.35
SMC5-201ENST00000361138 BCL2L11O43521 198 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 EPXP11678 715 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 RPL23AP62750 156 aaKnown RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 CSNK1G2P78368 415 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 IHHQ14623 411 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 ZNF511Q8NB15 262 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 GOT1L1Q8NHS2 421 aaPredicted RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 RRNAD1Q96FB5 475 aaKnown RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 NICN1Q9BSH3 213 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 NAA11Q9BSU3 229 aaPredicted RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 F3P13726 295 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 PMPCAQ10713 525 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 KIAA0141Q14154 515 aaPredicted RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 ELOCQ15369 112 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 GSG1Q2KHT4 349 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 ZNF425Q6IV72 752 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 TMEM151BQ8IW70 566 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 OR1F2PQ96R84 312 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 SLC46A2Q9BY10 475 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 ZMAT3Q9HA38 289 aaKnown RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 UBQLN4Q9NRR5 601 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 WNT3P56703 355 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 ARHGAP11BQ3KRB8 267 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 SOHLH1Q5JUK2 328 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 UQCC3Q6UW78 93 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 C9orf62Q8N4C0 152 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 SIRT6Q8N6T7 355 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 PLA2G12AQ9BZM1 189 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 SCPEP1Q9HB40 452 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 BLACEA4D250 179 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 OR2T1O43869 369 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 OR4E1P0C645 316 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 SLC16A11Q8NCK7 471 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 OR11A1Q9GZK7 315 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 TGIF2Q9GZN2 237 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 A0A0A6YYC8 382 aaPredicted RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 SERINC4A6NH21 518 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 I3L1I5 382 aaPredicted RBP12.85□□□□□ -0.35
SMC5-201ENST00000361138 SCGB1D1O95968 90 aa12.85□□□□□ -0.35
SMC5-201ENST00000361138 DCTDP32321 178 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms