RNA–Protein interactions for RNA: ENST00000359902.2

CCDC88B-203, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 2,326 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-203ENST00000359902 FAM47E-STBD1D6RA91 191 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 CTDSPLO15194 276 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 FADS1O60427 444 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 GPANK1O95872 356 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 ALOX5APP20292 161 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 DPP4P27487 766 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 MRPL28Q13084 256 aaKnown RBP18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 DPY19L4Q7Z388 723 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 IZUMO1Q8IYV9 350 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 SPEM1Q8N4L4 309 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 OR6N2Q8NGY6 317 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 KLHL15Q96M94 604 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 DPAGT1Q9H3H5 408 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 NUDT15Q9NV35 164 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 V9GY05 133 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 FER1L5A0AVI2 2057 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 A0A1B0GTH9 108 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 OR6C76A6NM76 312 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 C11orf98E9PRG8 122 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 ITGA10O75578 1167 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 ERP29P30040 261 aaKnown RBP18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 RPS27P42677 84 aaKnown RBP18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 GZMKP49863 264 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 FAPQ12884 760 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 Q499Y3 187 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 BCL2L15Q5TBC7 163 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 WDR74Q6RFH5 385 aaPredicted RBP18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 KMT5CQ86Y97 462 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 SLC25A36Q96CQ1 311 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 NUDT22Q9BRQ3 303 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 IKZF2Q9UKS7 526 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 PCNX3Q9H6A9 2034 aa18.85■□□□□ 0.61
CCDC88B-203ENST00000359902 TRAV6A0A075B6T7 132 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 A0A1B0GTQ1 180 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 SCO2O43819 266 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 SLC25A12O75746 678 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 C1QBP02746 253 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 EVI2BP34910 448 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 FOXL2P58012 376 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 CBFBQ13951 182 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 MTFR2Q6P444 385 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 SHISA6Q6ZSJ9 500 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 MAMDC2Q7Z304 686 aaPredicted RBP18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 PLPP5Q8NEB5 264 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 MNTQ99583 582 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 SDK1Q7Z5N4 2213 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 ALPK2Q86TB3 2170 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 TRBV5-5A0A0J9YX44 114 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 NPIPB7O75200 414 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 MT-ATP6P00846 226 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 TCRBP04435 133 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 P2RX1P51575 399 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 YOD1Q5VVQ6 348 aaPredicted RBP18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 CHRDL2Q6WN34 429 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 STAC2Q6ZMT1 411 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 FCRLAQ7L513 359 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 ADGRG3Q86Y34 549 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 THEM6Q8WUY1 208 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 SMIM4Q8WVI0 70 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 SLC25A38Q96DW6 304 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 INTS14Q96SY0 518 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 NIPAL2Q9H841 368 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 SLC22A11Q9NSA0 550 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 NUBP2Q9Y5Y2 271 aa18.84■□□□□ 0.61
CCDC88B-203ENST00000359902 TMED7-TICAM2A0A0A6YYA0 188 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 A6NL46 340 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 SUSD5O60279 629 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 DHFRP00374 187 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 ANKRD34CP0C6C1 535 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 GIFP27352 417 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 POLR2HP52434 150 aaKnown RBP18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 EGR3Q06889 387 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 SGCBQ16585 318 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 SIX5Q8N196 739 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 OR2G2Q8NGZ5 317 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 GPR119Q8TDV5 335 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 SCMH1Q96GD3 660 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 LIN7BQ9HAP6 207 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 TMED7Q9Y3B3 224 aa18.83■□□□□ 0.61
CCDC88B-203ENST00000359902 MYO15AQ9UKN7 3530 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 TP53BP1Q12888 1972 aaPredicted RBP18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 C7orf66A4D0T2 115 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 TRABD2BA6NFA1 517 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 OR4C45A6NMZ5 311 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 TMEM127O75204 238 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 SOX2P48431 317 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 CLDN12P56749 244 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 MAB21L1Q13394 359 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 KLF9Q13886 244 aaPredicted RBP18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 STPG1Q5TH74 334 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 COX15Q7KZN9 410 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 ZFAND1Q8TCF1 268 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 DUSP19Q8WTR2 217 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 SHDQ96IW2 340 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 CACNG6Q9BXT2 260 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 GHITMQ9H3K2 345 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 ZNF768Q9H5H4 540 aaKnown RBP18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 AUNIPQ9H7T9 357 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 TCF7L1Q9HCS4 588 aa18.83■□□□□ 0.6
CCDC88B-203ENST00000359902 TMEM14AQ9Y6G1 99 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms