RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 ALPK2Q86TB3 2170 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 ZG16O60844 167 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 CGAP01215 116 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 IGHMP01871 453 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 OPRM1P35372 400 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 POLR2IP36954 125 aaKnown RBP13.17□□□□□ -0.3
CCNE1-202ENST00000357943 DAP3P51398 398 aaKnown RBP13.17□□□□□ -0.3
CCNE1-202ENST00000357943 RPL27P61353 136 aaKnown RBP13.17□□□□□ -0.3
CCNE1-202ENST00000357943 CAMK2DQ13557 499 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 ARMC4Q5T2S8 1044 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 IQCF1Q8N6M8 205 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 TEX47Q8TBZ9 253 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 ASB10Q8WXI3 467 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 Q96M85 177 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 OR2M2Q96R28 347 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 NDEL1Q9GZM8 345 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 COQ3Q9NZJ6 369 aa13.17□□□□□ -0.3
CCNE1-202ENST00000357943 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 J3QKU1 62 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCNE1-202ENST00000357943 IL18BPO95998 194 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 IGHV3-9P01782 118 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 SDHAP31040 664 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 CRISP1P54107 249 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 ESRRGP62508 458 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 LGALS3BPQ08380 585 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 CDSNQ15517 529 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 TMEM236Q5W0B7 351 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 CARD17Q5XLA6 110 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 MTFR2Q6P444 385 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 TFAP2EQ6VUC0 442 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 TMEM123Q8N131 208 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 RELL2Q8NC24 303 aaPredicted RBP13.16□□□□□ -0.3
CCNE1-202ENST00000357943 OR2T33Q8NG76 320 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 OR6X1Q8NH79 312 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 RASD2Q96D21 266 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 ZNF570Q96NI8 536 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 ERMAPQ96PL5 475 aaPredicted RBP13.16□□□□□ -0.3
CCNE1-202ENST00000357943 OPN3Q9H1Y3 402 aaPredicted RBP13.16□□□□□ -0.3
CCNE1-202ENST00000357943 VCX3BQ9H321 246 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 PLSCR4Q9NRQ2 329 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 PARPBPQ9NWS1 579 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 GRHPRQ9UBQ7 328 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 PRSS50Q9UI38 385 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 RCE1Q9Y256 329 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 LRRC42Q9Y546 428 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 FLNCQ14315 2725 aa13.16□□□□□ -0.3
CCNE1-202ENST00000357943 MYO18BQ8IUG5 2567 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 TEX13CA0A0J9YWL9 993 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ZNF726A6NNF4 738 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 DLGAP1O14490 977 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 DVL2O14641 736 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 CHRNB4P30926 498 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ACVR1BP36896 505 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 OR3A2P47893 321 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 GIPRP48546 466 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 RPS6KA3P51812 740 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 PTGES3Q15185 160 aaKnown RBP13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ZIK1Q3SY52 487 aaPredicted RBP13.15□□□□□ -0.3
CCNE1-202ENST00000357943 MESTQ5EB52 335 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 SLC35F1Q5T1Q4 408 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 TSPO2Q5TGU0 170 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ACSM5Q6NUN0 579 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 LUZP2Q86TE4 346 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ZNF100Q8IYN0 542 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 LNX2Q8N448 690 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ARIH2OSQ8N7S6 290 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ZNF519Q8TB69 540 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 APH1AQ96BI3 265 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 SLC25A44Q96H78 314 aaPredicted RBP13.15□□□□□ -0.3
CCNE1-202ENST00000357943 ADAD1Q96M93 576 aaKnown RBP13.15□□□□□ -0.3
CCNE1-202ENST00000357943 RIBC2Q9H4K1 309 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 PROCRQ9UNN8 238 aa13.15□□□□□ -0.3
CCNE1-202ENST00000357943 INTS1Q8N201 2190 aaKnown RBP13.15□□□□□ -0.3
CCNE1-202ENST00000357943 EEF1E1-BLOC1S5C9J1V9 151 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 IMPA2O14732 288 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 ARPC3O15145 178 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 AKAP8O43823 692 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 UPK3AO75631 287 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 TRMUO75648 421 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 SNAP29O95721 258 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 PGA4P0DJD7 388 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 PGA3P0DJD8 388 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 CD8BP10966 210 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 APEHP13798 732 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 ACADSP16219 412 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 HIST1H1CP16403 213 aaKnown RBP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 NOS3P29474 1203 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 RAD23AP54725 363 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 CDK5Q00535 292 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.31
CCNE1-202ENST00000357943 NPRL3Q12980 569 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 GINS1Q14691 196 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 PGGHGQ32M88 737 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 PHYHD1Q5SRE7 291 aa13.14□□□□□ -0.31
CCNE1-202ENST00000357943 SLC27A4Q6P1M0 643 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms