RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 LRR1Q96L50 414 aa12.3□□□□□ -0.44
SEC13-202ENST00000350697 GPA33Q99795 319 aa12.3□□□□□ -0.44
SEC13-202ENST00000350697 EMC6Q9BV81 110 aa12.3□□□□□ -0.44
SEC13-202ENST00000350697 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
SEC13-202ENST00000350697 SIGLEC7Q9Y286 467 aa12.3□□□□□ -0.44
SEC13-202ENST00000350697 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
SEC13-202ENST00000350697 CENPEQ02224 2701 aa12.3□□□□□ -0.44
SEC13-202ENST00000350697 TUBAL3A6NHL2 446 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 MCIDASD6RGH6 385 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 PDLIM1O00151 329 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 HNRNPRO43390 633 aaKnown RBP12.29□□□□□ -0.44
SEC13-202ENST00000350697 E2F6O75461 281 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 NDUFB2O95178 105 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 BAG2O95816 211 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 IGHV1-2P23083 117 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 KIR2DL3P43628 341 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 IST1P53990 364 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 TSPAN31Q12999 210 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 SNTB1Q13884 538 aaKnown RBP12.29□□□□□ -0.44
SEC13-202ENST00000350697 MELKQ14680 651 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 ACKR1Q16570 336 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 GPR137CQ8N3F9 429 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 ZNF433Q8N7K0 673 aaPredicted RBP12.29□□□□□ -0.44
SEC13-202ENST00000350697 LRRC75AQ8NAA5 344 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 STEAP2Q8NFT2 490 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 PYDC1Q8WXC3 89 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 OR10A4Q9H209 315 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 TXNIPQ9H3M7 391 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 TAS2R16Q9NYV7 291 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 NKX1-2Q9UD57 310 aaPredicted RBP12.29□□□□□ -0.44
SEC13-202ENST00000350697 NDRG3Q9UGV2 375 aa12.29□□□□□ -0.44
SEC13-202ENST00000350697 ARRDC5A6NEK1 342 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ZNF587BE7ETH6 402 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 UPK3AO75631 287 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 LYZL6O75951 148 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 IGHMP01871 453 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ITGA5P08648 1049 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 FCGR1AP12314 374 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 PPP3CBP16298 524 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ZNF26P17031 533 aaPredicted RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 IL32P24001 234 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 FASP25445 335 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 MPGP29372 298 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 RPL4P36578 427 aaKnown RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 PTDSS1P48651 473 aaKnown RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 CTXN1P60606 82 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 LGALS3BPQ08380 585 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 CARD17Q5XLA6 110 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 SMARCD3Q6STE5 483 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 C20orf196Q8IYI0 205 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 AQP11Q8NBQ7 271 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 OR10G2Q8NGC3 310 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 OR6N1Q8NGY5 312 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 GIPC3Q8TF64 312 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ASB10Q8WXI3 467 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ZNF566Q969W8 418 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 SLC25A44Q96H78 314 aaPredicted RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 USB1Q9BQ65 265 aaKnown RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 DGCR6LQ9BY27 220 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ACTR6Q9GZN1 396 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 MGAT4BQ9UQ53 548 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 SH3D21A4FU49 640 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 CENPBD1B2RD01 187 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 GASTP01350 101 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 IGHG1P01857 330 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 CD14P08571 375 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 CSNK1A1P48729 337 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ARHGDIAP52565 204 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 RPL27P61353 136 aaKnown RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 TGFBR3Q03167 851 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 TOP3AQ13472 1001 aaPredicted RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 TSC22D1Q15714 1073 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ATP6AP1Q15904 470 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ARMC4Q5T2S8 1044 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 FAM205BPQ63HN1 556 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 ANKRD34AQ69YU3 496 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 HMBOX1Q6NT76 420 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 BHLHA15Q7RTS1 189 aaPredicted RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 TMEM179BQ7Z7N9 219 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 WDFY1Q8IWB7 410 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 PQLC1Q8N2U9 271 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 LINC01560Q8TB33 94 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 FANK1Q8TC84 345 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 FAM222BQ8WU58 562 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 S100PBPQ96BU1 408 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 DACH2Q96NX9 599 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 MED18Q9BUE0 208 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 BDH2Q9BUT1 245 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 KATNB1Q9BVA0 655 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 POLDIP3Q9BY77 421 aaKnown RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 VCXQ9H320 206 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 NTN4Q9HB63 628 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 B3GAT2Q9NPZ5 323 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 CRIM1Q9NZV1 1036 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 PDP1Q9P0J1 537 aaPredicted RBP12.28□□□□□ -0.44
SEC13-202ENST00000350697 KCNN3Q9UGI6 736 aa12.28□□□□□ -0.44
SEC13-202ENST00000350697 CIB4A0PJX0 185 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms