RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 CYCSP99999 105 aaKnown RBP7.45□□□□□ -1.22
ATG4A-201ENST00000343524 ACY1Q03154 408 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 TCF15Q12870 199 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 KIAA0141Q14154 515 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-201ENST00000343524 CCL14Q16627 93 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 ZXDCQ2QGD7 858 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-201ENST00000343524 LINC01559Q495D7 138 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 SLC35D3Q5M8T2 416 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 TMEM240Q5SV17 173 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 ATXN7L2Q5T6C5 722 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-201ENST00000343524 AGTRAPQ6RW13 159 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 UNQ9370/PRO34162Q6UXP9 181 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 MBOAT2Q6ZWT7 520 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 CHST9Q7L1S5 443 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 NUDT13Q86X67 352 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 VRK3Q8IV63 474 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 OR5T3Q8NGG3 340 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 OR10R2Q8NGX6 335 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 PRR7Q8TB68 274 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 ING5Q8WYH8 240 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 MAFIPQ8WZ33 124 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 OR8D1Q8WZ84 308 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 PMM1Q92871 262 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 R3HDM4Q96D70 268 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 WDR34Q96EX3 536 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 DERL3Q96Q80 235 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 TBX5Q99593 518 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 TIMP4Q99727 224 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 ORAI3Q9BRQ5 295 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 POFUT1Q9H488 388 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 IL26Q9NPH9 171 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 DMRT3Q9NQL9 472 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 NCDNQ9UBB6 729 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 ZMIZ1Q9ULJ6 1067 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 YBX2Q9Y2T7 364 aaKnown RBP7.45□□□□□ -1.22
ATG4A-201ENST00000343524 NOP16Q9Y3C1 178 aaKnown RBP7.45□□□□□ -1.22
ATG4A-201ENST00000343524 PRKAB1Q9Y478 270 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 CHD8Q9HCK8 2581 aa7.45□□□□□ -1.22
ATG4A-201ENST00000343524 DNAJC25-GNG10A0A024R161 153 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 MED19A0JLT2 244 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 RIIAD1A6NNX1 92 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 KLF4O43474 513 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PIP5K1CO60331 668 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PAPLNO95428 1278 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 FGBP02675 491 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ITGA5P08648 1049 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TBXA2RP21731 343 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 HTR2CP28335 458 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 BUD31P41223 144 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TSPAN7P41732 249 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SLC6A9P48067 706 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ADPRHP54922 357 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 UBE2MP61081 183 aaKnown RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SRSF5Q13243 272 aaKnown RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 MLC1Q15049 377 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 RSU1Q15404 277 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 USF2Q15853 346 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 AWAT1Q58HT5 328 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 NCMAPQ5T1S8 102 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 LIPNQ5VXI9 398 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 DPPA4Q7L190 304 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 C16orf59Q7L2K0 433 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 DCXRQ7Z4W1 244 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF227Q86WZ6 799 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 NRROSQ86YC3 692 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF614Q8N883 585 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PNLDC1Q8NA58 520 aaKnown RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF511Q8NB15 262 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ACBD4Q8NC06 268 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 OR2L5Q8NG80 312 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ADAMTS17Q8TE56 1095 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PPP1R1CQ8WVI7 109 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 THRSPQ92748 146 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 DIO2Q92813 273 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 FOXRED1Q96CU9 486 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 OTUB2Q96DC9 234 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 FBXO17Q96EF6 278 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 CPNE2Q96FN4 548 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 MED8Q96G25 268 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 KIRREL1Q96J84 757 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ARHGDIGQ99819 225 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SOX7Q9BT81 388 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TRMT61BQ9BVS5 477 aaKnown RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SLC17A9Q9BYT1 436 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 LAT2Q9GZY6 243 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 SLCO5A1Q9H2Y9 848 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TMEM231Q9H6L2 316 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 MEPEQ9NQ76 525 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 PARP11Q9NR21 331 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TAAR2Q9P1P5 351 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 KCNE5Q9UJ90 142 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 DYRK1BQ9Y463 629 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 WDFY4Q6ZS81 3184 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 IGLV3-16A0A075B6K0 115 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-201ENST00000343524 A0A1W2PPH5 198 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF587BE7ETH6 402 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 M0QZQ0 153 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 TAAR5O14804 337 aa7.44□□□□□ -1.22
ATG4A-201ENST00000343524 ZNF208O43345 1280 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms