RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 RFX2P48378 723 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 SNTB1Q13884 538 aaKnown RBP12.12□□□□□ -0.47
HLCS-201ENST00000336648 C18orf63Q68DL7 685 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 FAM180BQ6P0A1 224 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.12□□□□□ -0.47
HLCS-201ENST00000336648 C3orf30Q96M34 536 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 GMPR2Q9P2T1 348 aaKnown RBP12.12□□□□□ -0.47
HLCS-201ENST00000336648 LHX3Q9UBR4 397 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 GOLT1BQ9Y3E0 138 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 DNAJC25-GNG10A0A024R161 153 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 TRDV1A0A1B0GX56 115 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 TMEM235A6NFC5 223 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 NKX6-3A6NJ46 265 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 H0YGG7 62 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ZNF207O43670 478 aaKnown RBP12.12□□□□□ -0.47
HLCS-201ENST00000336648 MT-ATP6P00846 226 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 THBS1P07996 1170 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 CHRM2P08172 466 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ARSAP15289 507 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 IKZF1Q13422 519 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ADAMTSL4Q6UY14 1074 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 CNEP1R1Q8N9A8 125 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 OR13C2Q8NGS9 318 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 OR10Z1Q8NGY1 313 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 PIGQQ9BRB3 760 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 FBXL2Q9UKC9 423 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 IFT172Q9UG01 1749 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 TRAPPC2P0DI81 140 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 TRAPPC2BP0DI82 140 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 C17orf99Q6UX52 265 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 SLC46A3Q7Z3Q1 461 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 NHLRC2Q8NBF2 726 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 SYT11Q9BT88 431 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ZNF586Q9NXT0 402 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 GNG12Q9UBI6 72 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 C1SP09871 688 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ATXN1LP0C7T5 689 aaKnown RBP12.12□□□□□ -0.47
HLCS-201ENST00000336648 ABOP16442 354 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ABHD4Q8TB40 342 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 UTP23Q9BRU9 249 aaKnown RBP12.12□□□□□ -0.47
HLCS-201ENST00000336648 NUDT9Q9BW91 350 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 RYDENQ9NUL5 291 aaKnown RBP12.12□□□□□ -0.47
HLCS-201ENST00000336648 ASIC5Q9NY37 505 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 OR14J1Q9UGF5 321 aa12.12□□□□□ -0.47
HLCS-201ENST00000336648 ZNF814B7Z6K7 855 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 Q6ZTK2 550 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 SIGLECL1Q8N7X8 197 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
HLCS-201ENST00000336648 OR5M8Q8NGP6 311 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 NEURL3Q96EH8 262 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 LCORQ96JN0 433 aaPredicted RBP12.11□□□□□ -0.47
HLCS-201ENST00000336648 SPHK1Q9NYA1 384 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 HS3ST2Q9Y278 367 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 PPP5D1E7EU14 171 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 SLC16A6O15403 523 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 PAPLNO95428 1278 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 PAX6P26367 422 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 CHRNEQ04844 493 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 CDONQ4KMG0 1287 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 TMEM71Q6P5X7 295 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 BTNL8Q6UX41 500 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 DLK2Q6UY11 383 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 KLHDC1Q8N7A1 406 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 SCARB1Q8WTV0 552 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 ZFPM2Q8WW38 1151 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 FAM183AA6NL82 134 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 WNT11O96014 354 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 GASTP01350 101 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 POU3F3P20264 500 aaPredicted RBP12.11□□□□□ -0.47
HLCS-201ENST00000336648 BTG1P62324 171 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 SHEQ5VZ18 495 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 OR1S2Q8NGQ3 325 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 REEP6Q96HR9 211 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 TRBV4-1A0A0J9YWV2 114 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 SLC35E2P0CK97 266 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 OR8G3PP0DMU2 310 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 NTHL1P78549 312 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 SQSTM1Q13501 440 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 ALKBH1Q13686 389 aaKnown RBP12.11□□□□□ -0.47
HLCS-201ENST00000336648 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 LGI3Q8N145 548 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 CMTM2Q8TAZ6 248 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 KCNJ15Q99712 375 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
HLCS-201ENST00000336648 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
HLCS-201ENST00000336648 FAM155AB1AL88 458 aaPredicted RBP12.1□□□□□ -0.47
HLCS-201ENST00000336648 CTDSP2O14595 271 aa12.1□□□□□ -0.47
HLCS-201ENST00000336648 OR2C1O95371 312 aa12.1□□□□□ -0.47
HLCS-201ENST00000336648 NSA2O95478 260 aaKnown RBP12.1□□□□□ -0.47
HLCS-201ENST00000336648 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
HLCS-201ENST00000336648 HOXC5Q00444 222 aa12.1□□□□□ -0.47
HLCS-201ENST00000336648 TMEM176BQ3YBM2 270 aaPredicted RBP12.1□□□□□ -0.47
HLCS-201ENST00000336648 PTRH1Q86Y79 214 aaKnown RBP12.1□□□□□ -0.47
HLCS-201ENST00000336648 OR13F1Q8NGS4 319 aa12.1□□□□□ -0.47
HLCS-201ENST00000336648 KIRREL1Q96J84 757 aa12.1□□□□□ -0.47
HLCS-201ENST00000336648 FER1L6-AS2Q96M78 137 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms