RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 THEM6Q8WUY1 208 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 GIMAP1Q8WWP7 306 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 RELTQ969Z4 430 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 CMTM3Q96MX0 182 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 OR2M2Q96R28 347 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 ADAM19Q9H013 955 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 NKIRAS2Q9NYR9 191 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 CACNA1CQ13936 2221 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 SLC25A12O75746 678 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 ABHD16AO95870 558 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 PLGP00747 810 aaPredicted RBP16.06■□□□□ 0.16
LRCH3-201ENST00000334859 UBXN2BQ14CS0 331 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 C1orf189Q5VU69 101 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 C1QL3Q5VWW1 255 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 GPR139Q6DWJ6 353 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 DNAAF1Q8NEP3 725 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 BEST4Q8NFU0 473 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 OR1L3Q8NH93 324 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 CEP76Q8TAP6 659 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 SYNPRQ8TBG9 265 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 SLC25A36Q96CQ1 311 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 MVB12AQ96EY5 273 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 KLHL15Q96M94 604 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 INTS14Q96SY0 518 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 BEX1Q9HBH7 125 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 COPS7AQ9UBW8 275 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 ING1Q9UK53 422 aaPredicted RBP16.06■□□□□ 0.16
LRCH3-201ENST00000334859 ING4Q9UNL4 249 aa16.06■□□□□ 0.16
LRCH3-201ENST00000334859 H3BMH7 237 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 XKRYO14609 159 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 ANXA3P12429 323 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 HTR2BP41595 481 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 DYRK1AQ13627 763 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 COL19A1Q14993 1142 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 TMEM69Q5SWH9 247 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 ARHGAP40Q5TG30 622 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 OTPQ5XKR4 325 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 BTN2A1Q7KYR7 527 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.05■□□□□ 0.16
LRCH3-201ENST00000334859 ZNF687Q8N1G0 1237 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 ZNF676Q8N7Q3 588 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 OR52I2Q8NH67 350 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 NSMAFQ92636 917 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 RAB33BQ9H082 229 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 FKBP7Q9Y680 259 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 ABCA7Q8IZY2 2146 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 TCRBV16S1A1N1A0A5B0 115 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 ZNF593O00488 134 aaPredicted RBP16.05■□□□□ 0.16
LRCH3-201ENST00000334859 TSC22D2O75157 780 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 HLA-DQA2P01906 255 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 SYPP08247 313 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 CXCL3P19876 107 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 CENPAP49450 140 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 EPHA4P54764 986 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 GSG1Q2KHT4 349 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 EEF1A1P5Q5VTE0 462 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 CD276Q5ZPR3 534 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 SFRP4Q6FHJ7 346 aaPredicted RBP16.05■□□□□ 0.16
LRCH3-201ENST00000334859 TMPRSS12Q86WS5 348 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 OR8K3Q8NH51 312 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 DAZLQ92904 295 aaKnown RBP16.05■□□□□ 0.16
LRCH3-201ENST00000334859 S100A16Q96FQ6 103 aaKnown RBP16.05■□□□□ 0.16
LRCH3-201ENST00000334859 WWTR1Q9GZV5 400 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 COMMD4Q9H0A8 199 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 C20orf85Q9H1P6 137 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 C12orf10Q9HB07 376 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 AKAP7Q9P0M2 348 aaPredicted RBP16.05■□□□□ 0.16
LRCH3-201ENST00000334859 OR5V1Q9UGF6 321 aa16.05■□□□□ 0.16
LRCH3-201ENST00000334859 TRAV36DV7A0A075B6V5 113 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 ANXA2P2A6NMY6 339 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 SSNA1O43805 119 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 ANXA2P07355 339 aaKnown RBP16.04■□□□□ 0.16
LRCH3-201ENST00000334859 CSNK1EP49674 416 aaKnown RBP16.04■□□□□ 0.16
LRCH3-201ENST00000334859 DCAF7P61962 342 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 PWWP2BQ6NUJ5 590 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 LRRC69Q6ZNQ3 347 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 LUZP2Q86TE4 346 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 C9orf62Q8N4C0 152 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 OR2G2Q8NGZ5 317 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 C1orf216Q8TAB5 229 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 METTL21AQ8WXB1 218 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 SNAPC3Q92966 411 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 OMA1Q96E52 524 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 FOXN4Q96NZ1 517 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 ZNF304Q9HCX3 659 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 EMC7Q9NPA0 242 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 KLHL9Q9P2J3 617 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 RABL2AQ9UBK7 228 aaPredicted RBP16.04■□□□□ 0.16
LRCH3-201ENST00000334859 RABL2BQ9UNT1 228 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 UNC13CQ8NB66 2214 aa16.04■□□□□ 0.16
LRCH3-201ENST00000334859 IGHV1OR21-1A0A087WYE8 117 aa16.03■□□□□ 0.16
LRCH3-201ENST00000334859 CDC40O60508 579 aaKnown RBP eCLIP16.03■□□□□ 0.16
LRCH3-201ENST00000334859 KHDRBS3O75525 346 aaKnown RBP16.03■□□□□ 0.16
LRCH3-201ENST00000334859 KRT33AO76009 404 aa16.03■□□□□ 0.16
LRCH3-201ENST00000334859 BGLAPP02818 100 aa16.03■□□□□ 0.16
LRCH3-201ENST00000334859 GP1BBP13224 206 aa16.03■□□□□ 0.16
LRCH3-201ENST00000334859 ADRA2CP18825 462 aa16.03■□□□□ 0.16
LRCH3-201ENST00000334859 PGCP20142 388 aa16.03■□□□□ 0.16
LRCH3-201ENST00000334859 ALOX5APP20292 161 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms