RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 FRS3O43559 492 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 CRISP3P54108 245 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 DSTNP60981 165 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 LCN2P80188 198 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 SNTB2Q13425 540 aaKnown RBP12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 OTUD3Q5T2D3 398 aaPredicted RBP12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 AP1ARQ63HQ0 302 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 MYPOPQ86VE0 399 aaPredicted RBP12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 PEX5LQ8IYB4 626 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 GTF2H4Q92759 462 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 PPP1R14AQ96A00 147 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 ZHX1-C8orf76Q96EF9 292 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 THOC1Q96FV9 657 aaKnown RBP12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 MRPL37Q9BZE1 423 aaKnown RBP12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 PARPBPQ9NWS1 579 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 AURKAIP1Q9NWT8 199 aaPredicted RBP12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 ZNF232Q9UNY5 417 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 CORO2BQ9UQ03 480 aa12.58□□□□□ -0.4
CTHRC1-201ENST00000330295 DYNC2H1Q8NCM8 4307 aaKnown RBP12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 IGHV2OR16-5A0A0B4J2B6 119 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 EVPLLA8MZ36 301 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 C5orf58C9J3I9 102 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 CLIC1O00299 241 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 HOXA3O43365 443 aaPredicted RBP12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 UGT2B17O75795 530 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 CLPXO76031 633 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 IGKV3-15P01624 115 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 DBIP07108 87 aaKnown RBP12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 CELA3BP08861 270 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 CSF1P09603 554 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 UBTFL6P0CB48 400 aaPredicted RBP12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 IL7RP16871 459 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 ALDH3B1P43353 468 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 SEC24CP53992 1094 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 TUBA1BP68363 451 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 TUBA4AP68366 448 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 FADDQ13158 208 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 DAG1Q14118 895 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 PDCD1Q15116 288 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 MSMPQ1L6U9 139 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 TYW3Q6IPR3 259 aaKnown RBP12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 TUBA1AQ71U36 451 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 CCDC103Q8IW40 242 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 FAM169BQ8N8A8 192 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 ST8SIA1Q92185 356 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 FN3KRPQ9HA64 309 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 MOV10Q9HCE1 1003 aaKnown RBP12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 ASH2LQ9UBL3 628 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 SLC9A8Q9Y2E8 581 aa12.57□□□□□ -0.4
CTHRC1-201ENST00000330295 PPIAL4EA0A075B759 164 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 ARPC4-TTLL3A0A0A6YYG9 625 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 PPIAL4CA0A0B4J2A2 164 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 PPIAL4DF5H284 164 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 ETV2O00321 342 aaPredicted RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 ANGPT2O15123 496 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 OPN1MWP04001 364 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 PPIAL4FP0DN26 164 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 OPN1MW2P0DN77 364 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 OPN1MW3P0DN78 364 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 FKBP2P26885 142 aaKnown RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 RNF144AP50876 292 aaPredicted RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 KCNJ10P78508 379 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 DOC2BQ14184 412 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 LARS2Q15031 903 aaKnown RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 QPRTQ15274 297 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 SYPL1Q16563 259 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 SYT14P1Q58G82 188 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 COX20Q5RI15 118 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 KRT80Q6KB66 452 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 SLC2A7Q6PXP3 512 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 FIP1L1Q6UN15 594 aaKnown RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 FRRS1Q6ZNA5 592 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 ZNF440Q8IYI8 595 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 ANKFN1Q8N957 763 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 OR1K1Q8NGR3 316 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 ZNF563Q8TA94 476 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 TSPEARQ8WU66 669 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 THUMPD3Q9BV44 507 aaKnown RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 QRSL1Q9H0R6 528 aaKnown RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 NECAP2Q9NVZ3 263 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 LEF1Q9UJU2 399 aaPredicted RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 NDUFAF1Q9Y375 327 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 FLVCR1Q9Y5Y0 555 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 SPIN1Q9Y657 262 aaPredicted RBP12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 AUP1Q9Y679 476 aa12.56□□□□□ -0.4
CTHRC1-201ENST00000330295 A0A0G2JPF8 293 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 AGAP5A6NIR3 686 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 HNRNPCL2B2RXH8 293 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 HNRNPCL3B7ZW38 293 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 CDC14BO60729 498 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 HNRNPCL1O60812 293 aaKnown RBP12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 HNRNPCL4P0DMR1 293 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 ETFAP13804 333 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 SKP2Q13309 424 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 RGNQ15493 299 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 NDUFAF6Q330K2 333 aa12.55□□□□□ -0.4
CTHRC1-201ENST00000330295 FUNDC1Q8IVP5 155 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms