RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SIRT3Q9NTG7 399 aaPredicted RBP14.02□□□□□ -0.17
VARS2-201ENST00000321897 PRODH2Q9UF12 536 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 CYB5R1Q9UHQ9 305 aa14.02□□□□□ -0.17
VARS2-201ENST00000321897 TNS1Q9HBL0 1735 aaKnown RBP14.02□□□□□ -0.17
VARS2-201ENST00000321897 PRAMEF25A6NGN4 478 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 HLA-AP01891 365 aaKnown RBP14.01□□□□□ -0.17
VARS2-201ENST00000321897 UBE2IP63279 158 aaKnown RBP14.01□□□□□ -0.17
VARS2-201ENST00000321897 MELKQ14680 651 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 LGALSLQ3ZCW2 172 aaPredicted RBP14.01□□□□□ -0.17
VARS2-201ENST00000321897 PELOQ9BRX2 385 aaKnown RBP14.01□□□□□ -0.17
VARS2-201ENST00000321897 PTDSS2Q9BVG9 487 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 LIN7BQ9HAP6 207 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 ZNF304Q9HCX3 659 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 MAN2C1Q9NTJ4 1040 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 DOCK8Q8NF50 2099 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 CENPVL1A0A0U1RR11 272 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.01□□□□□ -0.17
VARS2-201ENST00000321897 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.01□□□□□ -0.17
VARS2-201ENST00000321897 D6RAR5 112 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 CDC42EP2O14613 210 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 PAPLNO95428 1278 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 HCKP08631 526 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 PPT1P50897 306 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 CCR9P51686 369 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 SGCAQ16586 387 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 TMEM65Q6PI78 240 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 MED25Q71SY5 747 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 SIRT6Q8N6T7 355 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 OR5AK2Q8NH90 309 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 MFSD8Q8NHS3 518 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 DLL4Q9NR61 685 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 CBLCQ9ULV8 474 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 ARHGEF17Q96PE2 2063 aaPredicted RBP14.01□□□□□ -0.17
VARS2-201ENST00000321897 RAB6AP20340 208 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 CXADRP78310 365 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 SPOCK1Q08629 439 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 VWA2Q5GFL6 755 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 TMEM205Q6UW68 189 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 ZNF620Q6ZNG0 422 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 RAB11FIP2Q7L804 512 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 OR6V1Q8N148 313 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 TMEM156Q8N614 296 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 OR51Q1Q8NH59 317 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 C20orf24Q9BUV8 137 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 ASB6Q9NWX5 421 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 POMT2Q9UKY4 750 aa14.01□□□□□ -0.17
VARS2-201ENST00000321897 APOC1P02654 83 aa14□□□□□ -0.17
VARS2-201ENST00000321897 UBBP0CG47 229 aa14□□□□□ -0.17
VARS2-201ENST00000321897 UBCP0CG48 685 aaKnown RBP14□□□□□ -0.17
VARS2-201ENST00000321897 HIST1H1CP16403 213 aaKnown RBP14□□□□□ -0.17
VARS2-201ENST00000321897 GFERP55789 205 aa14□□□□□ -0.17
VARS2-201ENST00000321897 GLYR1Q49A26 553 aaPredicted RBP14□□□□□ -0.17
VARS2-201ENST00000321897 PLPP6Q8IY26 295 aa14□□□□□ -0.17
VARS2-201ENST00000321897 OR51S1Q8NGJ8 323 aa14□□□□□ -0.17
VARS2-201ENST00000321897 HAVCR1Q96D42 359 aa14□□□□□ -0.17
VARS2-201ENST00000321897 GAS2L1Q99501 681 aaPredicted RBP14□□□□□ -0.17
VARS2-201ENST00000321897 VRK1Q99986 396 aaPredicted RBP14□□□□□ -0.17
VARS2-201ENST00000321897 ZNF649Q9BS31 505 aa14□□□□□ -0.17
VARS2-201ENST00000321897 ADAM29Q9UKF5 820 aa14□□□□□ -0.17
VARS2-201ENST00000321897 TRAPPC6AO75865 159 aa14□□□□□ -0.17
VARS2-201ENST00000321897 ITGA5P08648 1049 aa14□□□□□ -0.17
VARS2-201ENST00000321897 TRA2BP62995 288 aaKnown RBP14□□□□□ -0.17
VARS2-201ENST00000321897 PDZK1IP1Q13113 114 aa14□□□□□ -0.17
VARS2-201ENST00000321897 OR2AJ1Q8NGZ0 328 aa14□□□□□ -0.17
VARS2-201ENST00000321897 KCTD12Q96CX2 325 aaKnown RBP14□□□□□ -0.17
VARS2-201ENST00000321897 RNF170Q96K19 258 aa14□□□□□ -0.17
VARS2-201ENST00000321897 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
VARS2-201ENST00000321897 ABRACLQ9P1F3 81 aa14□□□□□ -0.17
VARS2-201ENST00000321897 ZBTB32Q9Y2Y4 487 aaPredicted RBP14□□□□□ -0.17
VARS2-201ENST00000321897 DVL2O14641 736 aa14□□□□□ -0.17
VARS2-201ENST00000321897 F10P00742 488 aa14□□□□□ -0.17
VARS2-201ENST00000321897 ZNF20P17024 532 aa14□□□□□ -0.17
VARS2-201ENST00000321897 POU3F2P20265 443 aaPredicted RBP14□□□□□ -0.17
VARS2-201ENST00000321897 RABIFP47224 123 aa14□□□□□ -0.17
VARS2-201ENST00000321897 ZNF628Q5EBL2 1059 aa14□□□□□ -0.17
VARS2-201ENST00000321897 EIF5AL1Q6IS14 154 aaKnown RBP14□□□□□ -0.17
VARS2-201ENST00000321897 BAIAP2L2Q6UXY1 529 aa14□□□□□ -0.17
VARS2-201ENST00000321897 OR4K17Q8NGC6 315 aa14□□□□□ -0.17
VARS2-201ENST00000321897 C15orf40Q8WUR7 153 aa14□□□□□ -0.17
VARS2-201ENST00000321897 BTBD2Q9BX70 525 aa14□□□□□ -0.17
VARS2-201ENST00000321897 DNTTIP1Q9H147 329 aa14□□□□□ -0.17
VARS2-201ENST00000321897 TSPAN10Q9H1Z9 355 aaPredicted RBP14□□□□□ -0.17
VARS2-201ENST00000321897 GPN3Q9UHW5 284 aaPredicted RBP14□□□□□ -0.17
VARS2-201ENST00000321897 ZNF726A6NNF4 738 aa14□□□□□ -0.17
VARS2-201ENST00000321897 IDSB3KWA1 339 aa14□□□□□ -0.17
VARS2-201ENST00000321897 ZNF878C9JN71 531 aa14□□□□□ -0.17
VARS2-201ENST00000321897 OIP5O43482 229 aa14□□□□□ -0.17
VARS2-201ENST00000321897 HEXBP07686 556 aa14□□□□□ -0.17
VARS2-201ENST00000321897 S1PR1P21453 382 aa14□□□□□ -0.17
VARS2-201ENST00000321897 SNU13P55769 128 aaKnown RBP14□□□□□ -0.17
VARS2-201ENST00000321897 TSC22D1Q15714 1073 aa14□□□□□ -0.17
VARS2-201ENST00000321897 RHOUQ7L0Q8 258 aa14□□□□□ -0.17
VARS2-201ENST00000321897 LINC00346Q8IVM7 164 aa14□□□□□ -0.17
VARS2-201ENST00000321897 OR11H4Q8NGC9 324 aa14□□□□□ -0.17
VARS2-201ENST00000321897 OR51D1Q8NGF3 324 aa14□□□□□ -0.17
VARS2-201ENST00000321897 A0A0B4J293 547 aa13.99□□□□□ -0.17
VARS2-201ENST00000321897 PRAMEF26H0Y7S4 382 aa13.99□□□□□ -0.17
VARS2-201ENST00000321897 FBLP22087 321 aaKnown RBP13.99□□□□□ -0.17
VARS2-201ENST00000321897 MAPK3P27361 379 aaPredicted RBP13.99□□□□□ -0.17
VARS2-201ENST00000321897 TACR3P29371 465 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms