RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ONECUT2O95948 504 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 HIST1H2ABP04908 130 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 WT1P19544 449 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 TRA2AQ13595 282 aaKnown RBP eCLIP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 HYAL4Q2M3T9 481 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 LRRN1Q6UXK5 716 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 HIST3H2AQ7L7L0 130 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 GID4Q8IVV7 300 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF440Q8IYI8 595 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ASB15Q8WXK1 588 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 HIST1H2ACQ93077 130 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 OR14A2Q96R54 314 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 CNN2Q99439 309 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF700Q9H0M5 742 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC25A18Q9H1K4 315 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 MRPL22Q9NWU5 206 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 COMMD3Q9UBI1 195 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 EXOSC1Q9Y3B2 195 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 FREM1Q5H8C1 2179 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ANKUB1A6NFN9 424 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF670-ZNF695F2Z2N8 137 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 DLGAP3O95886 979 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 PRKAR1AP10644 381 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 DIO1P49895 249 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 CLDN20P56880 219 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 OC90Q02509 493 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 CAMK2DQ13557 499 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 TPBGQ13641 420 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC25A35Q3KQZ1 300 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 VASH1Q7L8A9 365 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 PARP16Q8N5Y8 322 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 OR5L2Q8NGL0 311 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SIGLEC12Q96PQ1 595 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SDHCQ99643 169 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 B3GAT1Q9P2W7 334 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 C19orf25Q9UFG5 118 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 FARSAQ9Y285 508 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 COA3Q9Y2R0 106 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 KMT2EQ8IZD2 1858 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 NBASA2RRP1 2371 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 IFNGP01579 166 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ENPP1P22413 925 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 PRPS1P60891 318 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF829Q3KNS6 432 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 RAET1LQ5VY80 246 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 MTFR2Q6P444 385 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 NDUFAF7Q7L592 441 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 NEIL3Q8TAT5 605 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 THEM6Q8WUY1 208 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SNX33Q8WV41 574 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 RGP1Q92546 391 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 THOC3Q96J01 351 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 RNF32Q9H0A6 362 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 MIXL1Q9H2W2 232 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 BRD7Q9NPI1 651 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 FBXL3Q9UKT7 428 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SSR3Q9UNL2 185 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 PRR14LQ5THK1 2151 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 CLDN25C9JDP6 229 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 EIF1AYO14602 144 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ARPC3O15145 178 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SEC14L5O43304 696 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SPNP16150 400 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ENDOUP21128 410 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 TNFSF8P32971 234 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC6A8P48029 635 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SOX2P48431 317 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF41P51814 821 aaPredicted RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 TLE3Q04726 772 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 SLC19A3Q9BZV2 496 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 MRM2Q9UI43 246 aaKnown RBP6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ZNF229Q9UJW7 825 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 PCDHGA5Q9Y5G8 931 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 N6AMT1Q9Y5N5 214 aa6.28□□□□□ -1.4
LYSMD3-201ENST00000315948 ATRXP46100 2492 aa6.27□□□□□ -1.4
LYSMD3-201ENST00000315948 TTC36A6NLP5 189 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 SNTNA6NMZ2 147 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 B4E171 279 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 CASKO14936 926 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 ZIC3O60481 467 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 AHSA1O95433 338 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 ZNF883P0CG24 379 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 TSPAN7P41732 249 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 CLDN12P56749 244 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 RPS11P62280 158 aaKnown RBP eCLIP6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 RPL13AP3Q6NVV1 102 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 TMPRSS7Q7RTY8 843 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 TIGD4Q8IY51 512 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 DNAAF1Q8NEP3 725 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 OR4K17Q8NGC6 315 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 NXPE2Q96DL1 559 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 ZNF837Q96EG3 531 aaPredicted RBP6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 CYYR1Q96J86 154 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 TAAR9Q96RI9 348 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 KCNN2Q9H2S1 579 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 PLGRKTQ9HBL7 147 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 TIGARQ9NQ88 270 aa6.27□□□□□ -1.41
LYSMD3-201ENST00000315948 INIPQ9NRY2 104 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms