RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TMEM99Q8N816 258 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF248Q8NDW4 579 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 OR51L1Q8NGJ5 315 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 OR14L1PQ8NHC6 308 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SNIP1Q8TAD8 396 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SMPDL3BQ92485 455 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 MIB2Q96AX9 1013 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 DGCR14Q96DF8 476 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 SCMH1Q96GD3 660 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TSSK2Q96PF2 358 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 OR5M11Q96RB7 305 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TEAD3Q99594 435 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF649Q9BS31 505 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TXNIPQ9H3M7 391 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 FANCFQ9NPI8 374 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 NPDC1Q9NQX5 325 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 ASB6Q9NWX5 421 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 H2AFY2Q9P0M6 372 aaPredicted RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 B3GAT1Q9P2W7 334 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 GRHPRQ9UBQ7 328 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 LSM2Q9Y333 95 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 MRPS18CQ9Y3D5 142 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 HDGFL3Q9Y3E1 203 aa6.24□□□□□ -1.41
PTCD2-201ENST00000308077 TNRC6AQ8NDV7 1962 aaKnown RBP6.24□□□□□ -1.41
PTCD2-201ENST00000308077 A0A0J9YW62 118 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 A0A1W2PNV4 684 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 SNTNA6NMZ2 147 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 FAM166BA8MTA8 275 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 J3QRE1 110 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 SULT2B1O00204 365 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 DCTN6O00399 190 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 TRAPPC6AO75865 159 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 GLSO94925 669 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 PMS2P2O95744 297 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 IGHA1P01876 353 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 SPI1P17947 270 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 PAICSP22234 425 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 FKBP2P26885 142 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 PSMB9P28065 219 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CD79BP40259 229 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 MAGEA5P43359 124 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CD97P48960 835 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 TNFSF10P50591 281 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 GFRA1P56159 465 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CLDN20P56880 219 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 RPL27P61353 136 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 RPS7P62081 194 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ARG2P78540 354 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 RUNX1T1Q06455 604 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF766Q5HY98 468 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 EMC4Q5J8M3 183 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ARMC4Q5T2S8 1044 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 RNLSQ5VYX0 342 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 GPR139Q6DWJ6 353 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 LYPD4Q6UWN0 246 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 GGNQ86UU5 652 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CLVS1Q8IUQ0 354 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 TMEM251Q8N6I4 163 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ARIH2OSQ8N7S6 290 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ADPRHL1Q8NDY3 354 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 OR51G2Q8NGK0 314 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 C9orf43Q8TAL5 461 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 RORBQ92753 470 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ZMYND19Q96E35 227 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 NDEL1Q9GZM8 345 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 RPRD1BQ9NQG5 326 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 NDUFA13Q9P0J0 144 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 WARS2Q9UGM6 360 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 TRAPPC4Q9Y296 219 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 B3GALT5Q9Y2C3 310 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 KLF13Q9Y2Y9 288 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 F8P00451 2351 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ALPK2Q86TB3 2170 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CNTRLQ7Z7A1 2325 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CCDC160A6NGH7 325 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 SLC22A31A6NKX4 558 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 TNFSF11O14788 317 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ARHGEF9O43307 516 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 OR6A2O95222 327 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 HPNP05981 417 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 MRPL3P09001 348 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 LIMS3P0CW19 117 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 LIMS4P0CW20 117 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CD46P15529 392 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 DCKP27707 260 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 PYCR1P32322 319 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ACVR1BP36896 505 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 TGFBR2P37173 567 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 STARP49675 285 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 SLC16A1P53985 500 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 CLDN15P56746 228 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 POU3F1Q03052 451 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF239Q16600 458 aaKnown RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 LINC01590Q5TEZ4 76 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 GPR107Q5VW38 600 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
PTCD2-201ENST00000308077 PM20D2Q8IYS1 436 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 NANOGP1Q8N7R0 232 aa6.23□□□□□ -1.41
PTCD2-201ENST00000308077 SMAP2Q8WU79 429 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms