RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 A0A087WZY1 265 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 TEX51A0A1B0GUA7 166 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 AGAP14A8MT82 685 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 SCGB2A1O75556 95 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 MYOGP15173 224 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 IDUAP35475 653 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 CCL11P51671 97 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 SLC7A9P82251 487 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 CYCSP99999 105 aaKnown RBP11.7□□□□□ -0.54
USP38-201ENST00000307017 MPPED2Q15777 294 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 OR5L2Q8NGL0 311 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 UHRF2Q96PU4 802 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 DDOQ99489 341 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 TAF9BQ9HBM6 251 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 LANCL2Q9NS86 450 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 RIMBP3CA6NJZ7 1639 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 RIMBP3BA6NNM3 1639 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 RIMBP3Q9UFD9 1639 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ALPLP05186 524 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 GJA4P35212 333 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 GPR85P60893 370 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 TMEM41BQ5BJD5 291 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ADAMTS18Q8TE60 1221 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ZNF480Q8WV37 535 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 KHSRPQ92945 711 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■■■■□ 21.2
USP38-201ENST00000307017 TNFRSF19Q9NS68 423 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ASH2LQ9UBL3 628 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 OR2W5A6NFC9 320 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 OPN1MWP04001 364 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 OPN1MW2P0DN77 364 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 OPN1MW3P0DN78 364 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 SPINK9Q5DT21 86 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 FAM199XQ6PEV8 388 aaPredicted RBP11.69□□□□□ -0.54
USP38-201ENST00000307017 LCN15Q6UWW0 184 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 OR8B4Q96RC9 309 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 TAS2R5Q9NYW4 299 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 TMEM202A6NGA9 273 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 ITGB7P26010 798 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 CNN3Q15417 329 aaKnown RBP11.69□□□□□ -0.54
USP38-201ENST00000307017 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 A3GALT2U3KPV4 340 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 OR8U8P0C7N1 319 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 PMPCAQ10713 525 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 Q6ZTK2 550 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 PLPP5Q8NEB5 264 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 ZNF596Q8TC21 504 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 ALG12Q9BV10 488 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 NKX6-2Q9C056 277 aaPredicted RBP11.69□□□□□ -0.54
USP38-201ENST00000307017 SLC25A31Q9H0C2 315 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 TAS2R4Q9NYW5 299 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 A0A0J9YY10 115 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 CHEK1O14757 476 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 MMP2P08253 660 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 TRHRP34981 398 aaPredicted RBP11.69□□□□□ -0.54
USP38-201ENST00000307017 SOX18P35713 384 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 TAS2R31P59538 309 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 ZNF440Q8IYI8 595 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 DNAJC22Q8N4W6 341 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 CMBLQ96DG6 245 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 FCRL1Q96LA6 429 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 CUTCQ9NTM9 273 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 SEMA4GQ9NTN9 838 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 GNG12Q9UBI6 72 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 K7ESM1 405 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
USP38-201ENST00000307017 DPP4P27487 766 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 LBX1P52954 281 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 HTRA4P83105 476 aaPredicted RBP11.69□□□□□ -0.54
USP38-201ENST00000307017 KCTD11Q693B1 232 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 SYT13Q7L8C5 426 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 LRRC56Q8IYG6 542 aaPredicted RBP11.69□□□□□ -0.54
USP38-201ENST00000307017 TMEM106AQ96A25 262 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 NID2Q14112 1375 aa11.69□□□□□ -0.54
USP38-201ENST00000307017 TCRBV3S1A0A5B6 114 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 TCRBP04435 133 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 BCKDHBP21953 392 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 HTR2CP28335 458 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 GPLD1P80108 840 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 FLI1Q01543 452 aaPredicted RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 RNF128Q8TEB7 428 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 NANOS1Q8WY41 292 aaKnown RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 THOC3Q96J01 351 aaKnown RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 INSM2Q96T92 566 aaPredicted RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 PLA2G12AQ9BZM1 189 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 CLEC5AQ9NY25 188 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 XRN1Q8IZH2 1706 aaKnown RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 UNCXA6NJT0 531 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 AKR7A3O95154 331 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 RPS19P39019 145 aaKnown RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 KIAA0141Q14154 515 aaPredicted RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 DCXRQ7Z4W1 244 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 ZFPM2Q8WW38 1151 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 SLC39A13Q96H72 371 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 RHNO1Q9BSD3 238 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 EMC7Q9NPA0 242 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 ACOXLQ9NUZ1 547 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.68□□□□□ -0.54
USP38-201ENST00000307017 LRP5LA4QPB2 252 aa11.68□□□□□ -0.54
USP38-201ENST00000307017 C5AR1P21730 350 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms