RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SHOX2O60902 331 aaPredicted RBP23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 IGKV3-15P01624 115 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 IGLV1-44P01699 117 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 IGHV4-39P01824 125 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 CBR1P16152 277 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 IFNA8P32881 189 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 BIDP55957 195 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 SLC35D2Q76EJ3 337 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 NANOGNBQ7Z5D8 188 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 OR6X1Q8NH79 312 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 TMEM239Q8WW34 195 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 POFUT2Q9Y2G5 429 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 SETD2Q9BYW2 2564 aaPredicted RBP23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 C2CD3Q4AC94 2353 aa23.03■■□□□ 1.28
CDKN2A-201ENST00000304494 USF3Q68DE3 2245 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 HEXAP06865 529 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 CECR9P0C854 216 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 ARR3P36575 388 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 CSNK1A1P48729 337 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 NUDT2P50583 147 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 SLC7A2P52569 658 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 SEC24CP53992 1094 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 CHRNB3Q05901 458 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 C8orf82Q6P1X6 216 aaPredicted RBP23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 SLC46A3Q7Z3Q1 461 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 TREML1Q86YW5 311 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 NKAIN4Q8IVV8 208 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 TMEM255BQ8WV15 326 aa23.02■■□□□ 1.28
CDKN2A-201ENST00000304494 GSTA4O15217 222 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 CAPZA2P47755 286 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 NAAAQ02083 359 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 ST3GAL3Q11203 375 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 TNK1Q13470 666 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 ZNF627Q7L945 461 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 PFN4Q8NHR9 129 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 SGTBQ96EQ0 304 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 PRRC1Q96M27 445 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 FAM107BQ9H098 131 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 MYLK2Q9H1R3 596 aa23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 GDF2Q9UK05 429 aaPredicted RBP23.01■■□□□ 1.27
CDKN2A-201ENST00000304494 BLOC1S5-TXNDC5H3BN57 136 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 CXCR6O00574 342 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 NME4O00746 187 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 OR7A10O76100 309 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 ACVR1BP36896 505 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 UGT2B15P54855 530 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 ZNF813Q6ZN06 617 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 CPLX4Q7Z7G2 160 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 ZNF566Q969W8 418 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 SLC25A44Q96H78 314 aaPredicted RBP23■■□□□ 1.27
CDKN2A-201ENST00000304494 MED31Q9Y3C7 131 aa23■■□□□ 1.27
CDKN2A-201ENST00000304494 H7C417 338 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 NDUFS7O75251 213 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 SEC14L2O76054 403 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 LY6G6DO95868 133 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 FUT1P19526 365 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 PRDX6P30041 224 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 RAB35Q15286 201 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 WDFY1Q8IWB7 410 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 OR4F15Q8NGB8 312 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 NANOS1Q8WY41 292 aaKnown RBP22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 TMEM54Q969K7 222 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 FOXB1Q99853 325 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 GLTPQ9NZD2 209 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 PMF1-BGLAPU3KQ54 211 aa22.99■■□□□ 1.27
CDKN2A-201ENST00000304494 A0A1W2PRG6 482 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 HTR3EA5X5Y0 456 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 GMNCA6NCL1 334 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 SNX3O60493 162 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 ZNF682O95780 498 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 BCL10O95999 233 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 IFNW1P05000 195 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 LSP1P33241 339 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 IDH3GP51553 393 aaPredicted RBP22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 NUDT6P53370 316 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 Q71RC1 249 aaPredicted RBP22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 MDP1Q86V88 176 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 IL17RDQ8NFM7 739 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 LIPHQ8WWY8 451 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 GEMIN6Q8WXD5 167 aaKnown RBP22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 CA10Q9NS85 328 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 GMPR2Q9P2T1 348 aaKnown RBP22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 A4GNTQ9UNA3 340 aa22.98■■□□□ 1.27
CDKN2A-201ENST00000304494 SSX4O60224 188 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 ENTPD5O75356 428 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 B4GALT1P15291 398 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 DRD4P21917 467 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 GSK3BP49841 420 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 RPL18Q07020 188 aaKnown RBP22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 NPRL3Q12980 569 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 MELKQ14680 651 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 GSG1Q2KHT4 349 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 DNM1P46Q6ZS02 220 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 HDDC2Q7Z4H3 204 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 VTCN1Q7Z7D3 282 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 KCTD14Q9BQ13 255 aaPredicted RBP22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 DENND2DQ9H6A0 471 aaPredicted RBP22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 C20orf141Q9NUB4 165 aa22.97■■□□□ 1.27
CDKN2A-201ENST00000304494 ZNF503-AS2A6NEH8 195 aa22.96■■□□□ 1.27
CDKN2A-201ENST00000304494 PDE5AO76074 875 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms