RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 PET100P0DJ07 73 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 IVDP26440 423 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 GABRA4P48169 554 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 GSK3AP49840 483 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 HABP2Q14520 560 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 SPINK14Q6IE38 97 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 KAT6AQ92794 2004 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ANKRD33BA6NCL7 494 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 POLR2IP36954 125 aaKnown RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 CRMP1Q14194 572 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM244Q5VVB8 128 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 HACD4Q5VWC8 232 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 OR6F1Q8NGZ6 308 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 A0A0G2JMP0 313 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF736B4DX44 427 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 GPANK1O95872 356 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 MT-CO3P00414 261 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 BCKDHBP21953 392 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 EVI2BP34910 448 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 PGGHGQ32M88 737 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 CPZQ66K79 652 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 MOB3BQ86TA1 216 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 OR4M2Q8NGB6 313 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 POC1BQ8TC44 478 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 Q96M85 177 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 PTBP2Q9UKA9 531 aaKnown RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 TRAV36DV7A0A075B6V5 113 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 LRRC30A6NM36 301 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 AGFG2O95081 481 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 LGI1O95970 557 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 IL1AP01583 271 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 NUDT1P36639 197 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ASCL1P50553 236 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 OR1C1Q15619 314 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 BCL2A1Q16548 175 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 UBALD2Q8IYN6 164 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 GRPEL2Q8TAA5 225 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 UBE2FQ969M7 185 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF582Q96NG8 517 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ALG12Q9BV10 488 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 MEPEQ9NQ76 525 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 MTCH1Q9NZJ7 389 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 EMCNQ9ULC0 261 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 GLB1P16278 677 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 GABRB3P28472 473 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZXDAP98168 799 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 MVKQ03426 396 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 RBM14Q96PK6 669 aaKnown RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 MS4A8Q9BY19 250 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF391Q9UJN7 358 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 PLPP1O14494 284 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 FGF17O60258 216 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CDK2P24941 298 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 HOXC13P31276 330 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 SNCAP37840 140 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 WNT4P56705 351 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 NFATC3Q12968 1075 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 RDH10Q8IZV5 341 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 SLC43A2Q8N370 569 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CACNG6Q9BXT2 260 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OCIAD1Q9NX40 245 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 NAV1Q8NEY1 1877 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 E7ESA3 106 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 M0R082 166 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CTNSO60931 367 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 C21orf33P30042 268 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ALDH3B1P43353 468 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 IL13RA1P78552 427 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OR8G2PQ6IF36 304 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 SLCO4C1Q6ZQN7 724 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 DTWD2Q8NBA8 298 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF417Q8TAU3 575 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF587Q96SQ5 575 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 IER2Q9BTL4 223 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 HRH4Q9H3N8 390 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 NOX4Q9NPH5 578 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 HHLA2Q9UM44 414 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 MICAL3Q7RTP6 2002 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 NUDT19A8MXV4 375 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 YKT6O15498 198 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 PHF1O43189 567 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CREBL2O60519 120 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ATG12O94817 140 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 GPLD1P80108 840 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 INSM1Q01101 510 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OGFOD3Q6PK18 319 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OR10V1Q8NGI7 309 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CCL17Q92583 94 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 TSSK2Q96PF2 358 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 IFNA1P01562 189 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OPN1MWP04001 364 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OPN1MW2P0DN77 364 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OPN1MW3P0DN78 364 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 PKLRP30613 574 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 RPL23AP62750 156 aaKnown RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 REEP5Q00765 189 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 RAB31Q13636 194 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 EIF5AL1Q6IS14 154 aaKnown RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OR51E1Q8TCB6 317 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ORAI1Q96D31 301 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms