RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TOMM20Q15388 145 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 TMEM71Q6P5X7 295 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 KLHL15Q96M94 604 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 TXNIPQ9H3M7 391 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 PRUNE2Q8WUY3 3088 aa10.08□□□□□ -0.8
MSH3-201ENST00000265081 A0A087WV48 116 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 FAM240BA0A1B0GVZ2 78 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ANKUB1A6NFN9 424 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 TMEM212A6NML5 194 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 TFECO14948 347 aaPredicted RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 IL12BP29460 328 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 KIR3DL2P43630 455 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 CSNK1EP49674 416 aaKnown RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 MAP2K6P52564 334 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 SLC26A5P58743 744 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 RPL27P61353 136 aaKnown RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 VWA2Q5GFL6 755 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 FAM69AQ5T7M9 428 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 PWWP2BQ6NUJ5 590 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 LYPD8Q6UX82 237 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 STAC2Q6ZMT1 411 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 NANOGNBQ7Z5D8 188 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ANKRD37Q7Z713 158 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 CMTM4Q8IZR5 234 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 Q8N9G6 341 aaPredicted RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 LGALS14Q8TCE9 139 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ASB17Q8WXJ9 295 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 WDR77Q9BQA1 342 aaPredicted RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 FBXL3Q9UKT7 428 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 FOXJ3Q9UPW0 622 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 TMEM14AQ9Y6G1 99 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 TRIOO75962 3097 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 PRSS37A4D1T9 235 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 A8MVM7 634 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 BLOC1S5-TXNDC5H3BN57 136 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 SDC3O75056 442 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 NAGAP17050 411 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ERP29P30040 261 aaKnown RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 PLCXD2Q0VAA5 305 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 BICRALQ6AI39 1079 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 LAMTOR1Q6IAA8 161 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 THRSPQ92748 146 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 MRPL22Q9NWU5 206 aaKnown RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 PISDQ9UG56 409 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 A0A0A6YYJ9 748 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 CCDC163A0A0D9SF12 145 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 CENPXA8MT69 81 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 RAB40ALP0C0E4 278 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 FOSL2P15408 326 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 PSMB10P40306 273 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 BLVRAP53004 296 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 RNF4P78317 190 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 MRPS10P82664 201 aaKnown RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 INSM1Q01101 510 aaPredicted RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 PRAMEF17Q5VTA0 474 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 LIPNQ5VXI9 398 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ASPHD2Q6ICH7 369 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 SLC29A4Q7RTT9 530 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 MAMDC2Q7Z304 686 aaPredicted RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 PIAS4Q8N2W9 510 aaPredicted RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 YIPF7Q8N8F6 280 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 RAB40AQ8WXH6 277 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ST8SIA1Q92185 356 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 AKAP1Q92667 903 aaKnown RBP eCLIP10.07□□□□□ -0.8
MSH3-201ENST00000265081 TSSK2Q96PF2 358 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 B9D1Q9UPM9 204 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 RHBDD3Q9Y3P4 386 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 INMT-MINDY4F8WBC2 141 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ZNF208O43345 1280 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ADRB1P08588 477 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 RAB25P57735 213 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 DGCR2P98153 550 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 RASGEF1BQ0VAM2 473 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 FAPQ12884 760 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 ZNF239Q16600 458 aaKnown RBP10.07□□□□□ -0.8
MSH3-201ENST00000265081 LYPD6Q86Y78 171 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 PLCZ1Q86YW0 608 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 OR2G2Q8NGZ5 317 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 MIB2Q96AX9 1013 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 HAVCR1Q96D42 359 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 C4orf45Q96LM5 186 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 OR8B4Q96RC9 309 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 COPS7AQ9UBW8 275 aa10.07□□□□□ -0.8
MSH3-201ENST00000265081 TMED7-TICAM2A0A0A6YYA0 188 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 A0A0B4J203 849 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 TRABD2BA6NFA1 517 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 GABARAPH6UMI1 98 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 EEF1E1O43324 174 aaKnown RBP10.06□□□□□ -0.8
MSH3-201ENST00000265081 CPNE3O75131 537 aaKnown RBP10.06□□□□□ -0.8
MSH3-201ENST00000265081 ITGA10O75578 1167 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 RENP00797 406 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 F13BP05160 661 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 HPGDP15428 266 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 FSTP19883 344 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 RCVRNP35243 200 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 UBXN2BQ14CS0 331 aa10.06□□□□□ -0.8
MSH3-201ENST00000265081 NSDHLQ15738 373 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms