RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ALG10Q5BKT4 473 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF626Q68DY1 528 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 OR7E24Q6IFN5 339 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 LIN54Q6MZP7 749 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 LRRN1Q6UXK5 716 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 GSG1LQ6UXU4 331 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 GPAT4Q86UL3 456 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 DND1Q8IYX4 353 aaKnown RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 MUC20Q8N307 709 aaPredicted RBP11.3□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 HAVCR1Q96D42 359 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 SARGQ9BW04 601 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 Q9N2J8 555 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 KCNMB2Q9Y691 235 aa11.3□□□□□ -0.6
CHMP3-201ENST00000263856 LAMA1P25391 3075 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 C17orf51A8MQB3 221 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 CYR61O00622 381 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 CCSO14618 274 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 CTDSPLO15194 276 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 GPRIN2O60269 458 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 CTNSO60931 367 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 NMBP08949 121 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 HOXB2P14652 356 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 ACHEP22303 614 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 KIR2DS3Q14952 304 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 NHLRC3Q5JS37 347 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 B3GNTL1Q67FW5 361 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-201ENST00000263856 OOSP2Q86WS3 158 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 FBXW5Q969U6 566 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 MNTQ99583 582 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 PDCD10Q9BUL8 212 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 MFFQ9GZY8 342 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 COMMD4Q9H0A8 199 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 SYT4Q9H2B2 425 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 TCEAL2Q9H3H9 227 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-201ENST00000263856 GRHPRQ9UBQ7 328 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 MRM2Q9UI43 246 aaKnown RBP11.29□□□□□ -0.6
CHMP3-201ENST00000263856 FBXL3Q9UKT7 428 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 FANCMQ8IYD8 2048 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 GLCEO94923 617 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 NDUFB6O95139 128 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 APBB3O95704 486 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 HOXD4P09016 255 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-201ENST00000263856 TACSTD2P09758 323 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 DLX5P56178 289 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 GK2Q14410 553 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-201ENST00000263856 DPY19L2P2Q6ZN68 376 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 KCTD20Q7Z5Y7 419 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 CMIPQ8IY22 773 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 STK35Q8TDR2 534 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 ANKRD9Q96BM1 317 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-201ENST00000263856 WDR92Q96MX6 357 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 PTDSS2Q9BVG9 487 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 FAM60AQ9NP50 221 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 KLF15Q9UIH9 416 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 SERTAD3Q9UJW9 196 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 MOKQ9UQ07 419 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 SLC6A5Q9Y345 797 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF337Q9Y3M9 751 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 RWDD3Q9Y3V2 267 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 AUP1Q9Y679 476 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 SPTBN5Q9NRC6 3674 aaKnown RBP11.29□□□□□ -0.6
CHMP3-201ENST00000263856 EML5Q05BV3 1969 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 PTPRSQ13332 1948 aa11.29□□□□□ -0.6
CHMP3-201ENST00000263856 CDC14CA4D256 554 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 AK1P00568 194 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 CELA2BP08218 269 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-201ENST00000263856 MNDAP41218 407 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 POU3F4P49335 361 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 MGAT2Q10469 447 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 RBMS2Q15434 407 aaKnown RBP11.28□□□□□ -0.6
CHMP3-201ENST00000263856 NKPD1Q17RQ9 610 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 AVL9Q8NBF6 648 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 FAM71CQ8NEG0 241 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 MIB2Q96AX9 1013 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 SEC22AQ96IW7 307 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 RADILQ96JH8 1075 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 ZNF230Q9UIE0 474 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-201ENST00000263856 GPR160Q9UJ42 338 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 FBXO4Q9UKT5 387 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 SLC22A13Q9Y226 551 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 NPTNQ9Y639 398 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 WDR87Q6ZQQ6 2873 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 A0A087WV62 115 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 GALR3O60755 368 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-201ENST00000263856 PPM1BO75688 479 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 NKX2-2O95096 273 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 MAOBP27338 520 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 ARHGAP40Q5TG30 622 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 OR10K2Q6IF99 312 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 NPSR1Q6W5P4 371 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 HDDC2Q7Z4H3 204 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 FAM174AQ8TBP5 190 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 ST8SIA2Q92186 375 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 GAL3ST4Q96RP7 486 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 OPN4Q9UHM6 478 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 FBXL21Q9UKT6 434 aa11.28□□□□□ -0.6
CHMP3-201ENST00000263856 H3BUI4 141 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms