RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 ACTBL2Q562R1 376 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 AGAP6Q5VW22 663 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC16A9Q7RTY1 509 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 KANSL1Q7Z3B3 1105 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SEMA6DQ8NFY4 1073 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 OR4D6Q8NGJ1 314 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 CPNE4Q96A23 557 aaPredicted RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 GORASP2Q9H8Y8 452 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 HRH3Q9Y5N1 445 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 TNRC6CQ9HCJ0 1690 aaKnown RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 ICOSLGO75144 302 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 CAMLGP49069 296 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 RNF4P78317 190 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 DEFA5Q01523 94 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 HACD4Q5VWC8 232 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SMRP1Q8NCR6 262 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 NEURL3Q96EH8 262 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 TNFRSF13CQ96RJ3 184 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 FN3KRPQ9HA64 309 aa12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
PDGFRB-201ENST00000261799 SSX5O60225 188 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 RPL27P61353 136 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 RPS18P62269 152 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 COX15Q7KZN9 410 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SERPINA12Q8IW75 414 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 OXGR1Q96P68 337 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 EIF5A2Q9GZV4 153 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SPAARA0A1B0GVQ0 90 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 F5H0A9 414 aaPredicted RBP12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SYT5O00445 386 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 UBL3O95164 117 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 RAB3DO95716 219 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 CLIC3O95833 236 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 IFNA4P05014 189 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 OR8U9P0C7N5 309 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 RAB11AP62491 216 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 NADK2Q4G0N4 442 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SFRP5Q5T4F7 317 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 LINC00346Q8IVM7 164 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 DTWD1Q8N5C7 304 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 TFAP2CQ92754 450 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 PBDC1Q9BVG4 233 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 MRPS28Q9Y2Q9 187 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 LRP5LA4QPB2 252 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 IL1AP01583 271 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 FABP6P51161 128 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 MRPS10P82664 201 aaKnown RBP12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 DUSP2Q05923 314 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 ARHGAP11BQ3KRB8 267 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 CCSMST1Q4G0I0 132 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 ACSM3Q53FZ2 586 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 PRSS48Q7RTY5 328 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 FNDC9Q8TBE3 224 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 ZFP90Q8TF47 636 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC38A5Q8WUX1 472 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SGK3Q96BR1 496 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 MYH11P35749 1972 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 CDX4O14627 284 aaPredicted RBP12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 GOSR2O14653 212 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 FXNQ16595 210 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 RNF170Q96K19 258 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC25A31Q9H0C2 315 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 OR52A5Q9H2C5 316 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SEMA4GQ9NTN9 838 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SLC5A6Q9Y289 635 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
PDGFRB-201ENST00000261799 C5orf49A4QMS7 147 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 CLDN24A6NM45 220 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 KITLGP21583 273 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 TEAD1P28347 426 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 THBS3P49746 956 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 PNLIPRP2P54317 469 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 FZD2Q14332 565 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 FRMPD2BQ6IN97 320 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 TCTN3Q6NUS6 607 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 LPCAT3Q6P1A2 487 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 CLDN22Q8N7P3 220 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 RPP25Q9BUL9 199 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 CXorf36Q9H7Y0 433 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 SH2D1BO14796 132 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 MRPS14O60783 128 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 GM2AP17900 193 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 OR6F1Q8NGZ6 308 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 NT5CQ8TCD5 201 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 ANKRD9Q96BM1 317 aaPredicted RBP12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 UNKLQ9H9P5 680 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 DUSP22Q9NRW4 184 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 MED6O75586 246 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 GLRA1P23415 457 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 BTG2P78543 158 aa12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 PAN3Q58A45 887 aaKnown RBP12.46□□□□□ -0.41
PDGFRB-201ENST00000261799 FAM109BQ6ICB4 259 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms