RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 OTPQ5XKR4 325 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF511Q8NB15 262 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 DNAAF1Q8NEP3 725 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 OR8D4Q8NGM9 314 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 OR14L1PQ8NHC6 308 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 PGAM5Q96HS1 289 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 C19orf43Q9BQ61 176 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 C1QTNF6Q9BXI9 259 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RNF32Q9H0A6 362 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 TCEAL2Q9H3H9 227 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 FGF17O60258 216 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 OR2T7P0C7T2 308 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 MLF2Q15773 248 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 VWA2Q5GFL6 755 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 SPIN3Q5JUX0 258 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 AGBL4Q5VU57 503 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 OR7E24Q6IFN5 339 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 MFSD12Q6NUT3 480 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 MED25Q71SY5 747 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ZNF440Q8IYI8 595 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 CMTM4Q8IZR5 234 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 OR5T2Q8NGG2 359 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 OR2T27Q8NH04 317 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 SLC22A8Q8TCC7 542 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 GPR148Q8TDV2 347 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ZC3HAV1LQ96H79 300 aaKnown RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 SEC22AQ96IW7 307 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 NMNAT3Q96T66 252 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 STRADBQ9C0K7 418 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 OR10A5Q9H207 317 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 HRASLSQ9HDD0 168 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ANKRD10Q9NXR5 420 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 KCND3Q9UK17 655 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 DAPP1Q9UN19 280 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 LSM2Q9Y333 95 aaKnown RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 GIPP09681 153 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 SRMP19623 302 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 C21orf58P58505 322 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 BTG2P78543 158 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 EEF1A2Q05639 463 aaKnown RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 STK11Q15831 433 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 RNF113BQ8IZP6 322 aaKnown RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 AMER3Q8N944 861 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ANKRD53Q8N9V6 530 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 RELL2Q8NC24 303 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 FAM46BQ96A09 425 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ELSPBP1Q96BH3 223 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 PPP1R3EQ9H7J1 279 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 BCL2L10Q9HD36 194 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ZNF701Q9NV72 531 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 PISDQ9UG56 409 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 KCNE3Q9Y6H6 103 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 PAPPA2Q9BXP8 1791 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 TEX13DA0A0J9YY54 714 aaPredicted RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 TMEM72A0PK05 275 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ANKRD61A6NGH8 418 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 GMDSO60547 372 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 SCGB1D2O95969 90 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 P04436 131 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 APEHP13798 732 aaKnown RBP8.52□□□□□ -1.05
COL21A1-201ENST00000244728 S100GP29377 79 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 SLC51BQ86UW2 128 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 PPP1R3BQ86XI6 285 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 PXT1Q8NFP0 134 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 ZNF417Q8TAU3 575 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 DERL3Q96Q80 235 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 OR6C1Q96RD1 312 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 MRI1Q9BV20 369 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 DLL4Q9NR61 685 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 EMC3Q9P0I2 261 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 POMT2Q9UKY4 750 aa8.52□□□□□ -1.05
COL21A1-201ENST00000244728 TRBV11-1A0A0K0K1C0 115 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 H3BUI4 141 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 GABARAPH6UMI1 98 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 LANCL1O43813 399 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 HYAL3O43820 417 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 PRICKLE3O43900 615 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 OLFM2O95897 454 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 CLUP10909 449 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 HOXB3P14651 431 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 TACR3P29371 465 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 LSSP48449 732 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 RAB5BP61020 215 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 POU3F1Q03052 451 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 ABCA11PQ4W5N1 156 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 YOD1Q5VVQ6 348 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 ZNF836Q6ZNA1 936 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 STEAP2Q8NFT2 490 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 OR7G2Q8NG99 324 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 OR11H7Q8NGC8 314 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 PAQR8Q8TEZ7 354 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 THRSPQ92748 146 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 DVL3Q92997 716 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 ZNF707Q96C28 371 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 ZG16BQ96DA0 208 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 CNRIP1Q96F85 164 aaPredicted RBP8.51□□□□□ -1.05
COL21A1-201ENST00000244728 LRRC46Q96FV0 321 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 TCTN2Q96GX1 697 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 PARPBPQ9NWS1 579 aa8.51□□□□□ -1.05
COL21A1-201ENST00000244728 KLK11Q9UBX7 282 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms