RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ARHGEF17Q96PE2 2063 aaPredicted RBP18.16■□□□□ 0.5
HOXC13-201ENST00000243056 ANKRD20A5PA0PJZ0 165 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 IFITM10A6NMD0 228 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 RNASET2O00584 256 aaKnown RBP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 PPM1DO15297 605 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 FADS1O60427 444 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 IMPA1P29218 277 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 PFN3P60673 137 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 SRSF5Q13243 272 aaKnown RBP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 CLEC12AQ5QGZ9 265 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 TRIM40Q6P9F5 258 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 C11orf88Q6PI97 169 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 CAMKMTQ7Z624 323 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 TMEM200AQ86VY9 491 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 OR13C5Q8NGS8 318 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 OSTF1Q92882 214 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 DUSP15Q9H1R2 295 aaPredicted RBP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 RUVBL1Q9Y265 456 aaKnown RBP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 CBY1Q9Y3M2 126 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 A6NLC8 198 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 FGF16O43320 207 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 TYRP1P17643 537 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 ADH6P28332 368 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 CSNK1EP49674 416 aaKnown RBP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 ACSM2AQ08AH3 577 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 ILF3Q12906 894 aaKnown RBP eCLIP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 AADACL4Q5VUY2 407 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 ACSM2BQ68CK6 577 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 AGTRAPQ6RW13 159 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 C6orf120Q7Z4R8 191 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 SPEM1Q8N4L4 309 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 ZNF480Q8WV37 535 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 INSM2Q96T92 566 aaPredicted RBP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 NRIP2Q9BQI9 281 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 RCC2Q9P258 522 aaKnown RBP18.15■□□□□ 0.5
HOXC13-201ENST00000243056 VPS29Q9UBQ0 182 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 SPAG17Q6Q759 2223 aa18.15■□□□□ 0.5
HOXC13-201ENST00000243056 ETHE1O95571 254 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 CATP04040 527 aaKnown RBP18.14■□□□□ 0.5
HOXC13-201ENST00000243056 CD2P06729 351 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 NME1P15531 152 aaKnown RBP18.14■□□□□ 0.5
HOXC13-201ENST00000243056 CPT2P23786 658 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 AP3S2P59780 193 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 MRGPREQ86SM8 312 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 ABHD4Q8TB40 342 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 ARL11Q969Q4 196 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 S100PBPQ96BU1 408 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 TBX5Q99593 518 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 GFOD1Q9NXC2 390 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 ABRACLQ9P1F3 81 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 KLHL9Q9P2J3 617 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 TBC1D29Q9UFV1 150 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 NPFFR2Q9Y5X5 522 aa18.14■□□□□ 0.5
HOXC13-201ENST00000243056 CFAP54Q96N23 3096 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 A0A1W2PPK0 400 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 GABARAPH6UMI1 98 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 APBB3O95704 486 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 ANXA4P09525 319 aaPredicted RBP18.14■□□□□ 0.49
HOXC13-201ENST00000243056 AKT2P31751 481 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 BDH1Q02338 343 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 C1orf61Q13536 156 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 NFATC4Q14934 902 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 ALG11Q2TAA5 492 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 PXKQ7Z7A4 578 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 UBALD2Q8IYN6 164 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 OR4Q3Q8NH05 313 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 BRIX1Q8TDN6 353 aaKnown RBP18.14■□□□□ 0.49
HOXC13-201ENST00000243056 PATE1Q8WXA2 126 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 CLDN23Q96B33 292 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 A4GNTQ9UNA3 340 aa18.14■□□□□ 0.49
HOXC13-201ENST00000243056 ANKRD61A6NGH8 418 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 K7ESF4 209 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 IGLV3-19P01714 112 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 NR2C1P13056 603 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 DDTP30046 118 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 ATP6V1E1P36543 226 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 CXCL12P48061 93 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 MAPK14Q16539 360 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 OR5W2Q8NH69 310 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 TNFAIP8L1Q8WVP5 186 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 SOCS6O14544 535 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 YIF1AO95070 293 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 CD22P20273 847 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 RAB4BP61018 213 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 MPPED2Q15777 294 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 CXXC5Q7LFL8 322 aaKnown RBP18.13■□□□□ 0.49
HOXC13-201ENST00000243056 COMTD1Q86VU5 262 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 C17orf47Q8NEP4 570 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 SLC25A38Q96DW6 304 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 PIGQQ9BRB3 760 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 MESP1Q9BRJ9 268 aa18.13■□□□□ 0.49
HOXC13-201ENST00000243056 hCG_1809904A0A1W2PP81 198 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 A0A1W2PR64 198 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 A0A1W2PRV1 198 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 EMC8O43402 210 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 MT-ND4LP03901 98 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 THEGLP0DJG4 465 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 MPIP34949 423 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 SLC6A12P48065 614 aa18.12■□□□□ 0.49
HOXC13-201ENST00000243056 NRG3P56975 720 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms