RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 OR52I2Q8NH67 350 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 OR5B2Q96R09 309 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 FOXQ1Q9C009 403 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ZMAT3Q9HA38 289 aaKnown RBP11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 ADGRL4Q9HBW9 690 aa11.29□□□□□ -0.6
TM9SF4-201ENST00000217315 NAP1L6A6NFF2 107 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 BHLHE40O14503 412 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 RAB3DO95716 219 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 HOXC4P09017 264 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 PGAM2P15259 253 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 ATF1P18846 271 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 HLA-DMAP28067 261 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 SDHAP31040 664 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 WDR88Q6ZMY6 472 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 LINC00346Q8IVM7 164 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 GALNT6Q8NCL4 622 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 OR14A16Q8NHC5 309 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 HAVCR2Q8TDQ0 301 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 ANKRD9Q96BM1 317 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 MENTQ9BUN1 341 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 NIPAL2Q9H841 368 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 SRPK3Q9UPE1 567 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 IGHV5-51A0A0C4DH38 117 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 TRBV11-1A0A0K0K1C0 115 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 TMEM212A6NML5 194 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 SYT7O43581 403 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 LDOC1O95751 146 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 LIPCP11150 499 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 CD53P19397 219 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 CXCL12P48061 93 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 FNTBP49356 437 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 ACTBP60709 375 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 ACTG1P63261 375 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 SNTA1Q13424 505 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 EEF1A1P5Q5VTE0 462 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 TMEM205Q6UW68 189 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 SLC6A7Q99884 636 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 RNF32Q9H0A6 362 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 PCOLCE2Q9UKZ9 415 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 SPEF1Q9Y4P9 236 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 MEGF11A6BM72 1044 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 OR6C68A6NDL8 312 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 TP53I11O14683 189 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 ZNF208O43345 1280 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 PLPP2O43688 288 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 PRICKLE3O43900 615 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 RECKO95980 971 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 ZNF43P17038 809 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 MRPS10P82664 201 aaKnown RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 GLYR1Q49A26 553 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 YOD1Q5VVQ6 348 aaPredicted RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 RNLSQ5VYX0 342 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 CMTM4Q8IZR5 234 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 C3orf49Q96BT1 292 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 PRRG4Q9BZD6 226 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 AUNIPQ9H7T9 357 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 ZNF346Q9UL40 294 aaKnown RBP11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 RTTNQ86VV8 2226 aa11.28□□□□□ -0.6
TM9SF4-201ENST00000217315 DISC1C4P0D8 188 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 TSPAN4O14817 238 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 AKR7A2O43488 359 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 TRAPPC6AO75865 159 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 RFX2P48378 723 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 CLDN20P56880 219 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 LRRC69Q6ZNQ3 347 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 NEK7Q8TDX7 302 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 PPP1R14AQ96A00 147 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 DDIT4LQ96D03 193 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 FAM71F1Q96KD3 344 aaPredicted RBP11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 WDR77Q9BQA1 342 aaPredicted RBP11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 B3GAT2Q9NPZ5 323 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 ANAPC1Q9H1A4 1944 aa11.27□□□□□ -0.6
TM9SF4-201ENST00000217315 ZNF878C9JN71 531 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 TNFSF14O43557 240 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 PRAF2O60831 178 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 EPPINO95925 133 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 GZMKP49863 264 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 POLR2HP52434 150 aaKnown RBP11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 POU4F3Q15319 338 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 FOXRED2Q8IWF2 684 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 UEVLDQ8IX04 471 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 SLC22A8Q8TCC7 542 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 APOBEC4Q8WW27 367 aaKnown RBP11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 MCCC2Q9HCC0 563 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 EMC9Q9Y3B6 208 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 TCF20Q9UGU0 1960 aaKnown RBP11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 IFITM5A6NNB3 132 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 PLA2G10O15496 165 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 IGHA1P01876 353 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 C1QBP02746 253 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 ACKR1Q16570 336 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 AKIRIN2Q53H80 203 aa11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 PAPD4Q6PIY7 484 aaKnown RBP11.27□□□□□ -0.61
TM9SF4-201ENST00000217315 TMEM91Q6ZNR0 172 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms