RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 ALDH3B1P43353 468 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 PTDSS1P48651 473 aaKnown RBP16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 MRPL19P49406 292 aaKnown RBP16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 RGS8P57771 180 aaPredicted RBP16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 PUDPQ08623 228 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 OR1Q1Q15612 314 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 TRMT5Q32P41 509 aaKnown RBP16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 REEP3Q6NUK4 255 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 UGT2A3Q6UWM9 527 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 CARM1Q86X55 608 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 MEX3DQ86XN8 651 aaKnown RBP16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 KRT73Q86Y46 540 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 RNF217Q8TC41 542 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 FOXB1Q99853 325 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 SPATA5L1Q9BVQ7 753 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 ASPNQ9BXN1 380 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 ULBP2Q9BZM5 246 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 IKZF5Q9H5V7 419 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 VAPAQ9P0L0 249 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 MYEF2Q9P2K5 600 aaKnown RBP16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 POFUT2Q9Y2G5 429 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 USH1CQ9Y6N9 552 aa16.92■□□□□ 0.3
SYNGR1-201ENST00000216155 TCN1P20061 433 aaPredicted RBP16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 GIPRP48546 466 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 PMS2P3Q13401 168 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 MAD2L1BPQ15013 274 aaPredicted RBP16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 FXNQ16595 210 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 EPGNQ6UW88 154 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 LRP11Q86VZ4 500 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 FUNDC1Q8IVP5 155 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 OR6N1Q8NGY5 312 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 MS4A5Q9H3V2 200 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 NKIRAS1Q9NYS0 192 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 SELENONQ9NZV5 590 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 FZR1Q9UM11 496 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 SPEF1Q9Y4P9 236 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 NOX1Q9Y5S8 564 aa16.91■□□□□ 0.3
SYNGR1-201ENST00000216155 TRBV5-3A0A0A0MS03 114 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 B4DSR2 109 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 PLPP3O14495 311 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 SERPINI2O75830 405 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 RAB36O95755 333 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 PCMT1P22061 227 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 AQP1P29972 269 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 GPR6P46095 362 aaPredicted RBP16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 SEC24CP53992 1094 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 CDH12P55289 794 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 STX1BP61266 288 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 MAGOHP61326 146 aaKnown RBP16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 SCARB2Q14108 478 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 PAGE3Q5JUK9 113 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 GLCCI1Q86VQ1 547 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 CLDND2Q8NHS1 167 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 SPDL1Q96EA4 605 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 TMEM43Q9BTV4 400 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 RACGAP1Q9H0H5 632 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 NARFLQ9H6Q4 476 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 TMEM27Q9HBJ8 222 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 GMEB1Q9Y692 573 aa16.9■□□□□ 0.3
SYNGR1-201ENST00000216155 ZNF726A6NNF4 738 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 FAM157AC9JC47 383 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 WNT9BO14905 357 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 NCR1O76036 304 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 UBL3O95164 117 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 SAGP10523 405 aaPredicted RBP16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 ACHEP22303 614 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 AHCYP23526 432 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 COL8A2P25067 703 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 RPS23P62266 143 aaKnown RBP16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 RAB1AP62820 205 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 GALK2Q01415 458 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 SWT1Q5T5J6 900 aaKnown RBP16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 GKAP1Q5VSY0 366 aaPredicted RBP16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 BLOC1S3Q6QNY0 202 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 PXKQ7Z7A4 578 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 SNX32Q86XE0 403 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 ZNF584Q8IVC4 421 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 YIPF5Q969M3 257 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 DENND2DQ9H6A0 471 aaPredicted RBP16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 TMEM38AQ9H6F2 299 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 SLC52A3Q9NQ40 469 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 TCF7L2Q9NQB0 619 aa16.89■□□□□ 0.29
SYNGR1-201ENST00000216155 PRORSD1PA6NEY8 169 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 PATE4P0C8F1 98 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 PPIBP23284 216 aaKnown RBP16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 CSNK1A1P48729 337 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 RAB39AQ14964 217 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 WDR88Q6ZMY6 472 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 DEF8Q6ZN54 512 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 RANBP3LQ86VV4 465 aaPredicted RBP16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 C10orf53Q8N6V4 93 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 SEMA6DQ8NFY4 1073 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 OR5J2Q8NH18 312 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 FGFBP3Q8TAT2 258 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 RDH5Q92781 318 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 TMEM186Q96B77 213 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 TLCD1Q96CP7 247 aa16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 METTL17Q9H7H0 456 aaPredicted RBP16.88■□□□□ 0.29
SYNGR1-201ENST00000216155 LPAR2Q9HBW0 351 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms