RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Vmn1r139E9Q8L6 297 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Vmn1r112G3UY48 297 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Vmn1r135K9J7G0 307 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Vmn1r125L7N227 307 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Vmn1r116L7N2A6 307 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Grb2Q60631 217 aaKnown RBP9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Cpa4Q6P8K8 420 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Prmt8Q6PAK3 394 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Endod1Q8C522 501 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Zfp65Q91W94 390 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Trappc2Q9CQP2 140 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Vmn1r100Q9EPS5 307 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Gm13102A2ASJ3 519 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Gm10800D3Z496 220 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Amy1P00687 511 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Pnrc1Q3TWH3 297 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr1287Q7TQY1 305 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Papd4Q91YI6 484 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Ca7Q9ERQ8 264 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Isyna1Q9JHU9 557 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Lpar2Q9JL06 348 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Rpl3lE9PWZ3 407 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Sema3bQ62177 748 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 HeltQ7TS99 240 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 CdnfQ8CC36 187 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Cyb5r1Q9DB73 305 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Atrnl1Q6A051 1378 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Prpmp5E9PXN1 296 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f24J3QNQ5 498 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Gm21797J3QNW5 180 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Pgap2Q3TQR0 254 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 DgkzQ80UP3 929 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Rcc2Q8BK67 520 aaKnown RBP9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 CebpzosQ8BTE5 80 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 WacQ924H7 646 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 CsprsQ99388 208 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Ceacam20Q9D2Z1 577 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Mkrn2Q9ERV1 416 aaKnown RBP9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 C1qtnf3Q9ES30 246 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 RgrQ9Z2B3 291 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Daw1D3Z7A5 415 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 GlsD3Z7P3 674 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 ClppO88696 272 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Laptm4aQ60961 233 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr1321Q7TQW4 319 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Znf32Q80V23 272 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Tmbim1Q8BJZ3 309 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 PisdQ8BSF4 406 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Nob1Q8BW10 403 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Flvcr2Q91X85 551 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Ndrg2Q9QYG0 371 aaKnown RBP9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Adam23Q9R1V7 829 aa9.75□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Has2P70312 552 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr1307Q7TQX1 312 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr969Q8VG89 311 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Cdca3Q99M54 266 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Scp2d1Q9DAH1 156 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Ralgapa1Q6GYP7 2035 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Vmn2r28L7N203 852 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Vmn1r86L7N213 316 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Fam117bQ3U3E2 584 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Elavl2Q60899 360 aaKnown RBP9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr366Q7TRY4 309 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr309Q7TS01 308 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Slc36a3Q811P0 477 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Hdac8Q8VH37 377 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Pdzk1ip1Q9CQH0 114 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Nox4Q9JHI8 578 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Slc9a3r2Q9JHL1 337 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f15A0A087WR44 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f12A0A0A0MQP3 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f9A2BFZ7 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f7A2BHG6 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f19A2CG71 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f10A2CG92 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f3A2CGC2 496 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f13B8JKF6 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f2J3QMS5 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f25J3QMV9 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f6J3QMW9 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f26J3QNK2 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f8J3QQ50 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f17L7MU81 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f18L7MU83 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Tyrp1P07147 537 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f14Q1LZI5 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Btbd35f27Q5FWA1 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Scml4Q80VG1 408 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Chil6Q80W26 440 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Gpr68Q8BFQ3 365 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Dtd2Q8BHA3 168 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Pqlc3Q8C6U2 202 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr398Q8VFY0 314 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr575Q8VH16 318 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 GMCL1P1Q99N64 498 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Alyref2Q9JJW6 218 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 NcdnQ9Z0E0 729 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr601A2RS33 314 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Tbrg1Q3UB74 406 aa9.74□□□□□ -0.85
Scn8a-201ENSMUST00000082209 Olfr1219Q7TR04 311 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms