RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Rps27Q6ZWU9 84 aaKnown RBP9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc30a8Q8BGG0 367 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Nyap2Q8BM65 682 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 HinfpQ8K1K9 503 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Clec2dQ91V08 207 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Thumpd1Q99J36 350 aaKnown RBP9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Derl3Q9D8K3 228 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Raet1dQ9JI58 249 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Adam18Q9R157 719 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm42372A0A1B0GT27 204 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm572B1ARY8 399 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm8871F7AXK2 190 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Lin7bO88951 207 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Camk2aP11798 478 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 CpoxP36552 443 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 FaslgP41047 279 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ca10P61215 328 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ppp1caP62137 330 aaKnown RBP9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Actc1P68033 377 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Acta1P68134 377 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rnf180Q3U827 592 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 ScimpQ3UU41 150 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gpr107Q8BUV8 551 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Mtnr1bQ8CIQ6 364 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Slc38a1Q8K2P7 485 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr1079Q8VF52 315 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Elovl6Q920L5 267 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Q9DAR0 182 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Htr6Q9R1C8 440 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Decr2Q9WV68 292 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Bpnt1Q9Z0S1 308 aa9□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Frem2Q6NVD0 3160 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm21149A0A0G2JFY7 255 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 4930402F06RikA2AUQ8 332 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tomm5B1AXP6 51 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm5286E0CXI6 357 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm5799E9Q2M1 201 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr152G3X9L8 316 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Zfp616J3QN14 987 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm21797J3QNW5 180 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ntn1O09118 604 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Fgf3P05524 245 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tmco2P0C1V4 183 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 CfpP11680 464 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Msx1P13297 303 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rplp0P14869 317 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Klk1P15947 261 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Zfp59P16373 634 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 DbiP31786 87 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Aqp8P56404 261 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ap2s1P62743 142 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 N6amt1Q6SKR2 214 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 P4htmQ8BG58 503 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Atg4dQ8BGV9 474 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Amdhd2Q8JZV7 409 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rfc3Q8R323 356 aaKnown RBP8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr1390Q8VGW9 311 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Uqcrc1Q9CZ13 480 aaKnown RBP8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Dusp12Q9D0T2 339 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Phf1Q9Z1B8 559 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ighv1-13A0A075B5I0 98 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr1432A0A140LHS7 346 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm17949A0A1B0GRV7 212 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm20683H3BKJ1 410 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Cyp4a10O88833 509 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 PpibP24369 216 aaKnown RBP8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Mapk14P47811 360 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Kcnn3P58391 732 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ube2mP61082 183 aaKnown RBP8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Uap1l1Q3TW96 507 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rnase12Q5GAM8 145 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Dag1Q62165 893 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr1229Q7TQZ9 311 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Glrx5Q80Y14 152 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Sdhaf3Q8BQU3 125 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Fbxw17Q8CFE8 466 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 RergQ8R367 199 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Olfr799Q8VGI7 311 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Rab14Q91V41 215 aaKnown RBP8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Clint1Q99KN9 631 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tmem218Q9CQ44 115 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Cops7aQ9CZ04 275 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Efcab11Q9D0E5 162 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ca5bQ9QZA0 317 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 AireQ9Z0E3 552 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Lrit3W8DXL4 681 aa8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Arid1aA2BH40 2283 aaKnown RBP8.99□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gm20715E9Q3L7 95 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ifi204P0DOV2 619 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Gsx2P31316 305 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Prss55Q14BX2 321 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Klri2Q5DT36 248 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 4930512M02RikQ5SQK8 218 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Adam9Q61072 845 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Zfp82Q6P9Y7 530 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tns4Q8BZ33 696 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Nupl2Q8CIC2 420 aaKnown RBP8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Ctxn1Q8K129 82 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Tmem242Q8VCR3 140 aa8.98□□□□□ -0.97
Ccdc40-202ENSMUST00000053440 Duoxa1Q8VE49 341 aa8.98□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 42.5 ms