RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm9008E9PVG0 424 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ppt2O35448 302 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 ApelaP0DMC4 54 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rag2P21784 527 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Hsd11b1P50172 292 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Slc35f3Q1LZI2 421 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm10750Q3V0I0 133 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ptpn18Q61152 453 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tfap2eQ6VUP9 442 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rnf26Q8BUH7 424 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gpr107Q8BUV8 551 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tns4Q8BZ33 696 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Hist1h2aaQ8CGP4 129 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 RfesdQ8K2P6 157 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr672Q8VG28 312 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr578Q8VH17 313 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vmn1r71Q8VIC0 307 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 NtmQ99PJ0 344 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 HnrnpdlQ9Z130 301 aaKnown RBP12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Igkv12-44A0A140T8M2 115 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Igkv15-103A0A140T8P3 115 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 4933403O08RikF6UK53 379 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ppp2cbP62715 309 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ppp2caP63330 309 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Art5P70352 309 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Cnn2Q08093 305 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Q149G0 166 aaKnown RBP12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Khdc4Q3TCX3 612 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Mier2Q3U3N0 541 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Xrcc1Q60596 631 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Vdac3Q60931 283 aaKnown RBP12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Tgfbr2Q62312 592 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Hsh2dQ6VYH9 334 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 SynprQ8BGN8 265 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ap5m1Q8BJ63 490 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Pomgnt2Q8BW41 605 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ing4Q8C0D7 249 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Rbm34Q8C5L7 375 aaKnown RBP12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Spata33Q8C624 132 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Coq5Q9CXI0 327 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Ceacam20Q9D2Z1 577 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 C1qtnf2Q9D8U4 294 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Olfr971Q9EQ96 307 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Dock8Q8C147 2100 aa12.34□□□□□ -0.43
Nup88-201ENSMUST00000035283 Gm13762A2ATG2 311 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rarres1F6ZIS7 283 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cx3cl1O35188 395 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Prl4a1O35256 227 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 AurkcO88445 282 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 C4bpaP08607 469 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 AcrP23578 436 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Sox7P40646 380 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Csrp2P97314 193 aaKnown RBP12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 D17Wsu92eQ3TT38 291 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mfsd12Q3U481 476 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 1700057G04RikQ3V0U0 232 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mtmr11Q3V1L6 700 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Grhl3Q5FWH3 603 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rnase12Q5GAM8 145 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr12Q60894 333 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Azgp1Q64726 307 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Npr2Q6VVW5 1047 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1219Q7TR04 311 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fam98bQ80VD1 429 aaKnown RBP12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Q8BPC6 396 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slc43a1Q8BSM7 564 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Dusp28Q8BTR5 163 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cldn17Q8BXA6 224 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Arfrp1Q8BXL7 201 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 BphlQ8R164 291 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1079Q8VF52 315 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mrm1Q99J25 320 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Smarcd2Q99JR8 531 aaKnown RBP12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Clint1Q99KN9 631 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 SvbpQ99LQ4 66 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Sult1c2Q9D939 296 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 PmpcaQ9DC61 524 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Tssc4Q9JHE7 317 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Minpp1Q9Z2L6 481 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1255A2AUA4 310 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1224-ps1A3KGY4 311 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn2r34E9PVI0 852 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr550E9Q544 316 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn2r37F8VQD3 802 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn2r45L7N2B5 852 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn2r29L7N2D4 852 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Clec10aP49300 304 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Nhlrc4Q3UP44 136 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Znf488Q5HZG9 337 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slc38a8Q5HZH7 432 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Nr0b1Q61066 472 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Lrrc75aQ7TSF4 339 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 P4htmQ8BG58 503 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Foxj3Q8BUR3 623 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Samd7Q8C8Y5 445 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Csnka2ipQ8CH19 720 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Akr1c18Q8K023 323 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rtn4rl1Q8K0S5 445 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Aqp3Q8R2N1 292 aa12.33□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr651Q8VG78 313 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms