RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Otub2Q9CQX0 234 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Coq5Q9CXI0 327 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Rab3bQ9CZT8 219 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Rita1Q9D1H0 253 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Snapc3Q9D2C9 407 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ceacam20Q9D2Z1 577 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Vmn1r53Q9EP93 310 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ca7Q9ERQ8 264 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 PrndQ9QUG3 179 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ccdc166S4R181 449 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gm11214V9GX06 183 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Vmn1r175K7N6T9 304 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Mcpt2P15119 244 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 FaslgP41047 279 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ube2fbQ3UWQ3 185 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 St6gal1Q64685 403 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Zfp157Q6PCM4 567 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Fmr1nbQ80ZA7 238 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Commd7Q8BG94 200 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Tmem255aQ8BHW5 351 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Zbtb26Q8C8S0 451 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Babam2Q8K3W0 383 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ndc1Q8VCB1 673 aaKnown RBP11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cd209dQ91ZW8 237 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Q99K99 313 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Zdhhc6Q9CPV7 413 aa11.62□□□□□ -0.55
Rnf4-201ENSMUST00000030992 6330409D20RikA2AK85 162 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cx3cl1O35188 395 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Rack1P68040 317 aaKnown RBP11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Fgf14P70379 247 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Adam9Q61072 845 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Lrrn1Q61809 716 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Rcor3Q6PGA0 451 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 P4htmQ8BG58 503 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Tns4Q8BZ33 696 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gm9999Q8C5Y2 53 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Phf21bQ8C966 487 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Olfr98Q8VFD9 309 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gatad2bQ8VHR5 594 aaKnown RBP11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Hrh4Q91ZY2 391 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Dusp22Q99N11 184 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cdca4Q9CWM2 237 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Dcun1d5Q9CXV9 237 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Wdr5bQ9D7H2 328 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Exph5Q0VAV2 1960 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Zfp989H3BLB0 661 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ms4a18J3QN01 344 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Fcn1O70165 334 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 RykQ01887 594 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Defb25Q30KN8 71 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Mtmr11Q3V1L6 700 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Wbp1lQ8BGW2 348 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ip6k3Q8BWD2 396 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gpr1Q8K087 353 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Saysd1Q8K190 188 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Olfr1512Q8VF72 313 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Olfr558Q8VGZ7 317 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Tex13bQ99MW5 186 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Exosc5Q9CRA8 235 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Twsg1Q9EP52 222 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Sectm1bQ9JL59 212 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Zyg11aA2BFL2 627 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Smpd5D6MZJ6 483 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Zfp712E9PXJ4 705 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gm20390E9PZF0 267 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gosr2O35166 212 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ggta1P23336 394 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Rpl18P35980 188 aaKnown RBP11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Clec10aP49300 304 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Nme2Q01768 152 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Vmn1r11Q3SXA2 299 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Hsf5Q5ND04 624 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 CmahQ61419 577 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Cachd1Q6PDJ1 1288 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 2610318N02RikQ80VT5 305 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 ReltQ8BX43 436 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Hbq1aQ8BYM1 145 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Klhl12Q8BZM0 568 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Hpf1Q8CFE2 346 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Pom121Q8K3Z9 1200 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Q8R3Y5 413 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Oasl1Q8VI94 511 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Bcl7bQ921K9 202 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Chmp1b1Q99LU0 199 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Kti12Q9D1R2 351 aa11.61□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Nup214Q80U93 2085 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Trabd2bB1ATG9 517 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Mfsd4b5E9PYY6 479 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Prps1l3G3UXL2 318 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Slc6a18O88576 615 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 P01822 137 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 F9P16294 471 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Hoxd12P23812 268 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Gcnt2P97402 401 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Eif1aQ60872 144 aaKnown RBP11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Ifngr2Q63953 332 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Exosc3Q7TQK4 274 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Olfr1133Q7TR44 313 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Synpo2lQ8BWB1 975 aa11.6□□□□□ -0.55
Rnf4-201ENSMUST00000030992 Il17rcQ8K4C2 698 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms