RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 DHDDSQ86SQ9 333 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 TRIM69Q86WT6 500 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 BHLHE23Q8NDY6 225 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 FAM83FQ8NEG4 500 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-216ENST00000640058 OR10G3Q8NGC4 313 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 UBALD1Q8TB05 177 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 SCFD1Q8WVM8 642 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 NT5C3BQ969T7 300 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 PAGE5Q96GU1 130 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 OXGR1Q96P68 337 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 TAAR1Q96RJ0 339 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 RNF2Q99496 336 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 ZBTB18Q99592 522 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 NHEJ1Q9H9Q4 299 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-216ENST00000640058 FN3KRPQ9HA64 309 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 FOLH1BQ9HBA9 442 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 CCL28Q9NRJ3 127 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 COX16Q9P0S2 106 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 COPS3Q9UNS2 423 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 PIGLQ9Y2B2 252 aa2.41□□□□□ -2.02
CCDC7-216ENST00000640058 RPL36Q9Y3U8 105 aaKnown RBP2.41□□□□□ -2.02
CCDC7-216ENST00000640058 YTHDF2Q9Y5A9 579 aaKnown RBP2.41□□□□□ -2.02
CCDC7-216ENST00000640058 IGLV2-18A0A075B6J9 118 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 SYNJ2BP-COX16A0A087WUM0 186 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 LOC110117498-PIK3R3F6TDL0 507 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 HSD17B6O14756 317 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 RGS16O15492 202 aaPredicted RBP2.4□□□□□ -2.03
CCDC7-216ENST00000640058 TIMM8AO60220 97 aaPredicted RBP2.4□□□□□ -2.03
CCDC7-216ENST00000640058 CTDNEP1O95476 244 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 NCK1P16333 377 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 ANXA13P27216 316 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 CCR1P32246 355 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 SHMT2P34897 504 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 ATP1B3P54709 279 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 DUSP7Q16829 419 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 MAJINQ3KP22 176 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 FILIP1LQ4L180 1135 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 BCL7AQ4VC05 210 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 OR52E8Q6IFG1 317 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 PGAP1Q75T13 922 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 HMGN2P46Q86SG4 172 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 OR4K14Q8NGD5 310 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 MAGEE2Q8TD90 523 aaPredicted RBP2.4□□□□□ -2.03
CCDC7-216ENST00000640058 DTX3LQ8TDB6 740 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 SHC3Q92529 594 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 C10orf35Q96D05 121 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 RBM14Q96PK6 669 aaKnown RBP2.4□□□□□ -2.03
CCDC7-216ENST00000640058 REEP4Q9H6H4 257 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 SGK2Q9HBY8 427 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 STAP1Q9ULZ2 295 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 WIF1Q9Y5W5 379 aa2.4□□□□□ -2.03
CCDC7-216ENST00000640058 HIVEP2P31629 2446 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 LRP4O75096 1905 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 POLR2DO15514 142 aaKnown RBP2.39□□□□□ -2.03
CCDC7-216ENST00000640058 MED7O43513 233 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 RBBP9O75884 186 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 ATP5LO75964 103 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 GNA11P29992 359 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 CXCL5P42830 114 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 PKNOX1P55347 436 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 SEC61GP60059 68 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 RPL23AP62750 156 aaKnown RBP2.39□□□□□ -2.03
CCDC7-216ENST00000640058 CDK16Q00536 496 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 RSPO1Q2MKA7 263 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-216ENST00000640058 PARP15Q460N3 678 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 FRMPD2BQ6IN97 320 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 Q6ZR03 302 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 FTMTQ8N4E7 242 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 OR13C2Q8NGS9 318 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 UFD1Q92890 307 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 FGF11Q92914 225 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 TM4SF19Q96DZ7 209 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 FCRL1Q96LA6 429 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 LINC00477Q96M19 166 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 RPRD1AQ96P16 312 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-216ENST00000640058 COPS8Q99627 209 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 P2RY13Q9BPV8 354 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 MRPL45Q9BRJ2 306 aaKnown RBP2.39□□□□□ -2.03
CCDC7-216ENST00000640058 GON7Q9BXV9 100 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 RBKSQ9H477 322 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 CLMPQ9H6B4 373 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 NIPAL2Q9H841 368 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 ZNF430Q9H8G1 570 aaPredicted RBP2.39□□□□□ -2.03
CCDC7-216ENST00000640058 ZNF639Q9UID6 485 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 HEBP2Q9Y5Z4 205 aa2.39□□□□□ -2.03
CCDC7-216ENST00000640058 PIKFYVEQ9Y2I7 2098 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 FAM240BA0A1B0GVZ2 78 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 A0A1W2PPV9 198 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 TCRBV9S1A1TA0A576 114 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 PCP4L1A6NKN8 68 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 OR52A4PA6NMU1 304 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 AGPAT2O15120 278 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 UGT1A9O60656 530 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 SUPT3HO75486 399 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 PALMO75781 387 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 C6orf47O95873 294 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 CCDC130P13994 396 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 HMGB2P26583 209 aaKnown RBP2.38□□□□□ -2.03
CCDC7-216ENST00000640058 IL12AP29459 219 aa2.38□□□□□ -2.03
CCDC7-216ENST00000640058 FMO3P31513 532 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms