RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 DEF8Q6ZN54 512 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 LINGO2Q7L985 606 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 ARPINQ7Z6K5 226 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 MICU2Q8IYU8 434 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 ANKK1Q8NFD2 765 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 TPD52L3Q96J77 140 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 HS6ST2Q96MM7 605 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 OR2M2Q96R28 347 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
PNKP-228ENST00000637325 EMC6Q9BV81 110 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 CRLF2Q9HC73 371 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 NANSQ9NR45 359 aa12.07□□□□□ -0.48
PNKP-228ENST00000637325 RTTNQ86VV8 2226 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 ABCA1O95477 2261 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 ELOVL7A1L3X0 281 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 SLC35F4A4IF30 521 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 CD8AP01732 235 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 TNFRSF1BP20333 461 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 KDELR2P33947 212 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 TTKP33981 857 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 CRYBA2P53672 197 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 TUBA1BP68363 451 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 TUBA4AP68366 448 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 ZNF74Q16587 644 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 CEACAM16Q2WEN9 425 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 CYBRD1Q53TN4 286 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 CLEC9AQ6UXN8 241 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 TUBA1AQ71U36 451 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 SPATA21Q7Z572 469 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 PXKQ7Z7A4 578 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 DTX2Q86UW9 622 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 C20orf196Q8IYI0 205 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 MUC15Q8N387 334 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 OR6N1Q8NGY5 312 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 MAGEE2Q8TD90 523 aaPredicted RBP12.06□□□□□ -0.48
PNKP-228ENST00000637325 BOD1Q96IK1 185 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 TXNDC15Q96J42 360 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 ADAD1Q96M93 576 aaKnown RBP12.06□□□□□ -0.48
PNKP-228ENST00000637325 SLC38A2Q96QD8 506 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 SMR3AQ99954 134 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 ELAC2Q9BQ52 826 aaKnown RBP12.06□□□□□ -0.48
PNKP-228ENST00000637325 SLC19A3Q9BZV2 496 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 PCDHAC1Q9H158 963 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 EFCAB1Q9HAE3 211 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 MOV10Q9HCE1 1003 aaKnown RBP12.06□□□□□ -0.48
PNKP-228ENST00000637325 MED29Q9NX70 200 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 CR1P17927 2039 aa12.06□□□□□ -0.48
PNKP-228ENST00000637325 CHD3Q12873 2000 aaKnown RBP12.06□□□□□ -0.48
PNKP-228ENST00000637325 NIPBLQ6KC79 2804 aaeCLIP12.06□□□□□ -0.48
PNKP-228ENST00000637325 ARPC4-TTLL3A0A0A6YYG9 625 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 ATP6V1G2-DDX39BF2Z307 99 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 GSTA4O15217 222 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 RNF13O43567 381 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 SHOX2O60902 331 aaPredicted RBP12.05□□□□□ -0.48
PNKP-228ENST00000637325 LYPD3O95274 346 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 THY1P04216 161 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 IFNA8P32881 189 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 CAPZA2P47755 286 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 OR1E2P47887 323 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 CAMK2DQ13557 499 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 ETFDHQ16134 617 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 CLEC12BQ2HXU8 276 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 ZNF544Q6NX49 715 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 B3GLCTQ6Y288 498 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 Q71RC1 249 aaPredicted RBP12.05□□□□□ -0.48
PNKP-228ENST00000637325 TMEM123Q8N131 208 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 CIARTQ8N365 385 aaPredicted RBP12.05□□□□□ -0.48
PNKP-228ENST00000637325 LZICQ8WZA0 190 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 COX4I2Q96KJ9 171 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 LRR1Q96L50 414 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 HOPXQ9BPY8 73 aaPredicted RBP12.05□□□□□ -0.48
PNKP-228ENST00000637325 GRIP2Q9C0E4 1043 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 POLR2J2Q9GZM3 115 aaKnown RBP12.05□□□□□ -0.48
PNKP-228ENST00000637325 FAM107BQ9H098 131 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 NSRP1Q9H0G5 558 aaKnown RBP12.05□□□□□ -0.48
PNKP-228ENST00000637325 POLR2J3Q9H1A7 115 aaKnown RBP12.05□□□□□ -0.48
PNKP-228ENST00000637325 CBLN4Q9NTU7 201 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 CMTM6Q9NX76 183 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 RIMS3Q9UJD0 308 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 ZNF229Q9UJW7 825 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 MOKQ9UQ07 419 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 POFUT2Q9Y2G5 429 aa12.05□□□□□ -0.48
PNKP-228ENST00000637325 IGHV1-18A0A0C4DH31 117 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 ZNF99A8MXY4 864 aaPredicted RBP12.04□□□□□ -0.48
PNKP-228ENST00000637325 OR5F1O95221 314 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 CRYAAP02489 173 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 BMP4P12644 408 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 IFNGR1P15260 489 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 APOBEC3AP31941 199 aaPredicted RBP12.04□□□□□ -0.48
PNKP-228ENST00000637325 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 BIDP55957 195 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 LIPEQ05469 1076 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 CHRNB3Q05901 458 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 ZP4Q12836 540 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 PHYHD1Q5SRE7 291 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 NANOGNBQ7Z5D8 188 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 TSPYL5Q86VY4 417 aaPredicted RBP12.04□□□□□ -0.48
PNKP-228ENST00000637325 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
PNKP-228ENST00000637325 ZNF837Q96EG3 531 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms