RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ADGRG7Q96K78 797 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 MOGAT1Q96PD6 335 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 FEVQ99581 238 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 RACGAP1Q9H0H5 632 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 RIBC2Q9H4K1 309 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 KIF17Q9P2E2 1029 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 PSORS1C1Q9UIG5 152 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 TMEM5Q9Y2B1 443 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 SVILO95425 2214 aa12.95□□□□□ -0.34
LINC00339-208ENST00000634934 GCN1Q92616 2671 aaKnown RBP12.94□□□□□ -0.34
LINC00339-208ENST00000634934 SH3D21A4FU49 640 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 OR14I1A6ND48 311 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 LIPT2A6NK58 231 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 EFCAB9A8MZ26 197 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 PTGES3LE9PB15 166 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 XPNPEP2O43895 674 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 MPZL2O60487 215 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 OR7A10O76100 309 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 GASTP01350 101 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 BGLAPP02818 100 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 MT-ND2P03891 347 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 CPN1P15169 458 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 ABOP16442 354 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 FUT1P19526 365 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 OMPP47874 163 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 CTBP2P56545 445 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 CSNK2A1P68400 391 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-208ENST00000634934 LTBQ06643 244 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 IGFBP7Q16270 282 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF74Q16587 644 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 ANKRD34AQ69YU3 496 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF770Q6IQ21 691 aaPredicted RBP12.94□□□□□ -0.34
LINC00339-208ENST00000634934 ENTHD1Q8IYW4 607 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 LRRC17Q8N6Y2 441 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF540Q8NDQ6 660 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 MFSD8Q8NHS3 518 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 GNPDA2Q8TDQ7 276 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 APH1BQ8WW43 257 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 NEURL2Q9BR09 285 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 SLIRPQ9GZT3 109 aaKnown RBP12.94□□□□□ -0.34
LINC00339-208ENST00000634934 TIGARQ9NQ88 270 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 NANSQ9NR45 359 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 CCDC59Q9P031 241 aaKnown RBP12.94□□□□□ -0.34
LINC00339-208ENST00000634934 TRAPPC4Q9Y296 219 aa12.94□□□□□ -0.34
LINC00339-208ENST00000634934 HTR3EA5X5Y0 456 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 FAM20BO75063 409 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 PMS2P2O95744 297 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 MT-ATP6P00846 226 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 IGF2P01344 180 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 HIST1H2ABP04908 130 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 TPOP07202 933 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 EDN3P14138 238 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 PLA2G2AP14555 144 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 GABRB1P18505 474 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 GRPRP30550 384 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 PPP5CP53041 499 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 SLC35A1P78382 337 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 GXYLT1Q4G148 440 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 C1orf94Q6P1W5 598 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF585AQ6P3V2 769 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 HIST3H2AQ7L7L0 130 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 MAMDC2Q7Z304 686 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-208ENST00000634934 SLC46A3Q7Z3Q1 461 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 CCDC71Q8IV32 467 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-208ENST00000634934 PM20D2Q8IYS1 436 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 HIST1H2ACQ93077 130 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 LGALS12Q96DT0 336 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF845Q96IR2 970 aaPredicted RBP12.93□□□□□ -0.34
LINC00339-208ENST00000634934 GPA33Q99795 319 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 ASPNQ9BXN1 380 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 SRXN1Q9BYN0 137 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 PRDM14Q9GZV8 571 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 SP140LQ9H930 580 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF556Q9HAH1 456 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 SIAEQ9HAT2 523 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 CNOT2Q9NZN8 540 aaKnown RBP12.93□□□□□ -0.34
LINC00339-208ENST00000634934 MGAT4BQ9UQ53 548 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 TENM4Q6N022 2769 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 SHANK1Q9Y566 2161 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 UNC119BA6NIH7 251 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 CLCA1A8K7I4 914 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 FTCDNL1E5RQL4 147 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 AKR7A3O95154 331 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 FMO3P31513 532 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 ETV6P41212 452 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 RAC3P60763 192 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 IL1RL1Q01638 556 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 RBPJQ06330 500 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 IRF3Q14653 427 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 MFSD13AQ14CX5 517 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 TMPRSS11FQ6ZWK6 438 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 OR13C2Q8NGS9 318 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 OR6S1Q8NH40 331 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 OR51A7Q8NH64 312 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 ZHX1-C8orf76Q96EF9 292 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 NIPSNAP1Q9BPW8 284 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 CCDC90BQ9GZT6 254 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 FKRPQ9H9S5 495 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms