RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-209ENST00000634889 HIF3AQ9Y2N7 669 aa13□□□□□ -0.33
CDC42BPB-209ENST00000634889 CIB4A0PJX0 185 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 AQP12BA6NM10 295 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 ZNF587BE7ETH6 402 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 C11orf98E9PRG8 122 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 GSC2O15499 205 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 RNF13O43567 381 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 KRT36O76013 467 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 DIRAS1O95057 198 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 ITGA5P08648 1049 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 SAGP10523 405 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 MAKP20794 623 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 LSM11P83369 360 aaKnown RBP eCLIP12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 SPIBQ01892 262 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 CHRNB3Q05901 458 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 TSC22D1Q15714 1073 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 TIMM23BQ5SRD1 257 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 TBPL2Q6SJ96 375 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 TMPRSS11FQ6ZWK6 438 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 SLC35D2Q76EJ3 337 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 OAFQ86UD1 273 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 TMEM200AQ86VY9 491 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 AQP12AQ8IXF9 295 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 C17orf78Q8N4C9 275 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 OR6X1Q8NH79 312 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 LRR1Q96L50 414 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 ALKBH3Q96Q83 286 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 FUZQ9BT04 418 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 CADM1Q9BY67 442 aaKnown RBP12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 LRMDAQ9H2I8 198 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 RASSF1Q9NS23 344 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 MED29Q9NX70 200 aa12.99□□□□□ -0.33
CDC42BPB-209ENST00000634889 APCP25054 2843 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 TRBV4-1A0A0J9YWV2 114 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 A0A1W2PRG6 482 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 SLC35F4A4IF30 521 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 NPIPB13A6NJU9 1138 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 OR5H1A6NKK0 313 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 EFCAB9A8MZ26 197 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 NPIPB4C9JG80 1138 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 RPL36A-HNRNPH2H7BZ11 118 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 RAD51DO75771 328 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 THBDP07204 575 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 RAP2AP10114 183 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 IFNGR1P15260 489 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 RRM2P31350 389 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 SH3BGRP55822 239 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 FLOT2Q14254 428 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 C22orf34Q6ZV56 151 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 HDDC2Q7Z4H3 204 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 GPR137CQ8N3F9 429 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 OR52J3Q8NH60 311 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 ZC3HAV1LQ96H79 300 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 TXNDC15Q96J42 360 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 MUS81Q96NY9 551 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 INIPQ9NRY2 104 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 POMPQ9Y244 141 aa12.98□□□□□ -0.33
CDC42BPB-209ENST00000634889 NBPF19A0A087WUL8 3843 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 SH3PXD2BA1X283 911 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 ZNF726A6NNF4 738 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 UPK3AO75631 287 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 SERPINI2O75830 405 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 AQP2P41181 271 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 OMPP47874 163 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 LIMS1P48059 325 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 DAP3P51398 398 aaKnown RBP12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 HMGA2P52926 109 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 BIDP55957 195 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 PRPS1P60891 318 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 ROR2Q01974 943 aaKnown RBP12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 LGALS3BPQ08380 585 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 SEC23BQ15437 767 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 TAF11Q15544 211 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 TAB1Q15750 504 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 GABRA6Q16445 453 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 ALG10Q5BKT4 473 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 HMBOX1Q6NT76 420 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 LINGO2Q7L985 606 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 MUCL1Q96DR8 90 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 SLC25A44Q96H78 314 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 ALPK1Q96QP1 1244 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 EMC6Q9BV81 110 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 POLDIP3Q9BY77 421 aaKnown RBP12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 NDEL1Q9GZM8 345 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 CLEC4MQ9H2X3 399 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 NGBQ9NPG2 151 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 B3GAT2Q9NPZ5 323 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 STX18Q9P2W9 335 aaKnown RBP12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 SLC7A8Q9UHI5 535 aa12.97□□□□□ -0.33
CDC42BPB-209ENST00000634889 DHRS12A0PJE2 317 aa12.96□□□□□ -0.33
CDC42BPB-209ENST00000634889 DEFB108AA8MXU0 73 aa12.96□□□□□ -0.33
CDC42BPB-209ENST00000634889 CENPBD1B2RD01 187 aa12.96□□□□□ -0.33
CDC42BPB-209ENST00000634889 CDC42EP2O14613 210 aa12.96□□□□□ -0.33
CDC42BPB-209ENST00000634889 CLOCKO15516 846 aa12.96□□□□□ -0.33
CDC42BPB-209ENST00000634889 BCL10O95999 233 aa12.96□□□□□ -0.33
CDC42BPB-209ENST00000634889 HRGP04196 525 aa12.96□□□□□ -0.33
CDC42BPB-209ENST00000634889 F13BP05160 661 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms