RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SLC39A9Q9NUM3 307 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 HRASLS2Q9NWW9 162 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 NME1P15531 152 aaKnown RBP8.26□□□□□ -1.09
VCL-206ENST00000623461 EFNA3P52797 238 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 SEC13P55735 322 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 MRPS34P82930 218 aaKnown RBP8.26□□□□□ -1.09
VCL-206ENST00000623461 DPPA4Q7L190 304 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 GLCCI1Q86VQ1 547 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 EDAQ92838 391 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 C20orf24Q9BUV8 137 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 RFPL4AA6NLU0 287 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 RFPL4AL1F8VTS6 287 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 K7ERQ8 282 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 TXNDC12O95881 172 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 SOD1P00441 154 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 AKR1C1Q04828 323 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 CARD17Q5XLA6 110 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 GLDNQ6ZMI3 551 aaPredicted RBP8.26□□□□□ -1.09
VCL-206ENST00000623461 Q6ZTK2 550 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 SLC22A24Q8N4F4 322 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 SPICQ8N5J4 248 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 PRSS16Q9NQE7 514 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 SLC25A37Q9NYZ2 338 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 RREB1Q92766 1687 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.26□□□□□ -1.09
VCL-206ENST00000623461 TMEM269A0A1B0GVZ9 245 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.26□□□□□ -1.09
VCL-206ENST00000623461 C6P13671 934 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 PSMB3P49720 205 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 HOXC5Q00444 222 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 SERTAD2Q14140 314 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 TMEM207Q6UWW9 146 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 TECPR1Q7Z6L1 1165 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 PHYHIPLQ96FC7 376 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 ELF4Q99607 663 aaPredicted RBP8.26□□□□□ -1.09
VCL-206ENST00000623461 SPHK2Q9NRA0 654 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 CYSLTR2Q9NS75 346 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 FBXL12Q9NXK8 326 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 GNG13Q9P2W3 67 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 CACNA1SQ13698 1873 aa8.26□□□□□ -1.09
VCL-206ENST00000623461 TP53I11O14683 189 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 KLK8O60259 260 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 HOXC13P31276 330 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 OR2B8PP59922 312 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 HSF5Q4G112 596 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 TMEM81Q6P7N7 255 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SSX7Q7RTT5 188 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 OR2L13Q8N349 312 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 ZNF808Q8N4W9 903 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 FAM160A2Q8N612 972 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 BPIFCQ8NFQ6 507 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 OR1S2Q8NGQ3 325 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 DVL3Q92997 716 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 ZNF160Q9HCG1 818 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SERTAD3Q9UJW9 196 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TRAV1-2A0A0B4J238 106 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 BLACEA4D250 179 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 B4DGG1 531 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 HHLA1C9JL84 531 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 BRINP1O60477 761 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 DLX2Q07687 328 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 ALKBH2Q6NS38 261 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 CHST8Q9H2A9 424 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 UBQLN3Q9H347 655 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 LTB4R2Q9NPC1 389 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 CD300CQ08708 224 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 MSMO1Q15800 293 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 OR1J1Q8NGS3 322 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SMIM4Q8WVI0 70 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TMED6Q8WW62 240 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TSSK2Q96PF2 358 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 CXorf36Q9H7Y0 433 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SERTAD4Q9NUC0 356 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 FAM227AF5H4B4 570 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 ZNF43P17038 809 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 PRLHRP49683 370 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SHC2P98077 582 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 LY6G5CQ5SRR4 150 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 GDF7Q7Z4P5 450 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 C15orf54Q8N8G6 183 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TEX19Q8NA77 164 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 ZNF480Q8WV37 535 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TMEM59Q9BXS4 323 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 PLEKHA2Q9HB19 425 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 DLL4Q9NR61 685 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 GPR34Q9UPC5 381 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TRIP11Q15643 1979 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 PTGESO14684 152 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 CHRM2P08172 466 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SLC6A11P48066 632 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 CRMP1Q14194 572 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 MRPL2Q5T653 305 aaKnown RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 BRICD5Q6PL45 260 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 FIGLAQ6QHK4 219 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SGK3Q96BR1 496 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 OR10A5Q9H207 317 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 OR10A2Q9H208 303 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 ASH2LQ9UBL3 628 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 PPT2Q9UMR5 302 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 RBBP6Q7Z6E9 1792 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms