RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 EXOSC3Q9NQT5 275 aaKnown RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 UBQLN4Q9NRR5 601 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 RHBDL2Q9NX52 303 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 TRAPPC4Q9Y296 219 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 GSTK1Q9Y2Q3 226 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 HECTD1Q9ULT8 2610 aa19.44■□□□□ 0.7
SGMS1-210ENST00000619438 USP9XQ93008 2570 aaPredicted RBP19.44■□□□□ 0.7
SGMS1-210ENST00000619438 HK1P19367 917 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 RUNX1T1Q06455 604 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 ARHGAP11AQ6P4F7 1023 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 TMPRSS11AQ6ZMR5 421 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 SNX29P2Q8IUI4 249 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 SULF2Q8IWU5 870 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 ZNF527Q8NB42 609 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 SLC37A3Q8NCC5 494 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 CCDC32Q9BV29 185 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 SNTG1Q9NSN8 517 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 ESPL1Q14674 2120 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 TRAV27A0A087WT01 109 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 CCDC182A6NF36 153 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 CTDSP2O14595 271 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 LALBAP00709 142 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 ZNF3P17036 446 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 SLC2A5P22732 501 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 CD79BP40259 229 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 GPR85P60893 370 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 EBPQ15125 230 aaKnown RBP19.43■□□□□ 0.7
SGMS1-210ENST00000619438 ZNF324BQ6AW86 544 aaPredicted RBP19.43■□□□□ 0.7
SGMS1-210ENST00000619438 GFRALQ6UXV0 394 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 ARIH2OSQ8N7S6 290 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 OR51A7Q8NH64 312 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 C1GALT1C1Q96EU7 318 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 SGCZQ96LD1 299 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 TNFRSF13CQ96RJ3 184 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 TEAD3Q99594 435 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 SLC30A2Q9BRI3 323 aa19.43■□□□□ 0.7
SGMS1-210ENST00000619438 FRG2CA6NGY1 282 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 ZNF354AO60765 605 aaPredicted RBP19.42■□□□□ 0.7
SGMS1-210ENST00000619438 AGFG2O95081 481 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 CDRT1O95170 752 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 IFNGP01579 166 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 HLA-DPB1P04440 258 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 MST1P26927 711 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 TNFSF8P32971 234 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 CAPZA2P47755 286 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 MEOX1P50221 254 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 NR0B1P51843 470 aaKnown RBP19.42■□□□□ 0.7
SGMS1-210ENST00000619438 DCAF7P61962 342 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 CRYZQ08257 329 aaKnown RBP19.42■□□□□ 0.7
SGMS1-210ENST00000619438 NNATQ16517 81 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 SLC35F1Q5T1Q4 408 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 C22orf42Q6IC83 251 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 CADM2Q8N3J6 435 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 OR51G2Q8NGK0 314 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 SPRYD4Q8WW59 207 aaPredicted RBP19.42■□□□□ 0.7
SGMS1-210ENST00000619438 SGTBQ96EQ0 304 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 KCNS3Q9BQ31 491 aa19.42■□□□□ 0.7
SGMS1-210ENST00000619438 MRTO4Q9UKD2 239 aaKnown RBP19.42■□□□□ 0.7
SGMS1-210ENST00000619438 NDUFB2O95178 105 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 CD53P19397 219 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 PSPHP78330 225 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 FABP5Q01469 135 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 STEAP3Q658P3 488 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 TMEM203Q969S6 136 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 C3orf49Q96BT1 292 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 CEP19Q96LK0 163 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 FRMD6Q96NE9 622 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 HCAR1Q9BXC0 346 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 TSPAN10Q9H1Z9 355 aaPredicted RBP19.41■□□□□ 0.7
SGMS1-210ENST00000619438 ABCB10Q9NRK6 738 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 OSGIN2Q9Y236 505 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 PTPN13Q12923 2485 aa19.41■□□□□ 0.7
SGMS1-210ENST00000619438 C12orf71A8MTZ7 269 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 NPIPA5E9PKD4 350 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 TBX1O43435 398 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 PPP1R3DO95685 299 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 P04436 131 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 NRG3P56975 720 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 SRSF1Q07955 248 aaKnown RBP eCLIP19.4■□□□□ 0.7
SGMS1-210ENST00000619438 POU4F2Q12837 409 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 KRR1Q13601 381 aaKnown RBP19.4■□□□□ 0.7
SGMS1-210ENST00000619438 GALEQ14376 348 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 SLC22A16Q86VW1 577 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 ADIPOR1Q96A54 375 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 TP53INP1Q96A56 240 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 OTULINQ96BN8 352 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 ARSGQ96EG1 525 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 LCORQ96JN0 433 aaPredicted RBP19.4■□□□□ 0.7
SGMS1-210ENST00000619438 MED20Q9H944 212 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 BABAM2Q9NXR7 383 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 CHRNA9Q9UGM1 479 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 KLHL21Q9UJP4 597 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 NPIPA1Q9UND3 350 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 DOPEY2Q9Y3R5 2298 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 PNMTP11086 282 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 ZNF24P17028 368 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 RFC3P40938 356 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 RANBP1P43487 201 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 TDGF1P3P51864 188 aa19.4■□□□□ 0.7
SGMS1-210ENST00000619438 CRMP1Q14194 572 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms