RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 OSGIN1Q9UJX0 560 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 NOX1Q9Y5S8 564 aa3.86□□□□□ -1.79
SNCA-213ENST00000618500 LOC100653049A0A140TA62 436 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 ZNF503-AS2A6NEH8 195 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 GMFGO60234 142 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 UPK3AO75631 287 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 KRT34O76011 436 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 UBOX5O94941 541 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 CRYBA1P05813 215 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 NHLRC4P0CG21 123 aaPredicted RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 TFPIP10646 304 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 ARRB2P32121 409 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 ALDH3B1P43353 468 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MAGEA4P43358 317 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 CCT3P49368 545 aaKnown RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 CALCOCO2Q13137 446 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 CDK5R2Q13319 367 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 NDUFAF6Q330K2 333 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 HP1BP3Q5SSJ5 553 aaPredicted RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 ZNF774Q6NX45 483 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 UNQ6126/PRO20091Q6UXV3 157 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 FRMD7Q6ZUT3 714 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 RNF130Q86XS8 419 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 CCDC103Q8IW40 242 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 WDFY1Q8IWB7 410 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 KIR3DL3Q8N743 410 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 GLB1L3Q8NCI6 653 aaPredicted RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 LINC01006Q8NI28 216 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 SYNPRQ8TBG9 265 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MRAPQ8TCY5 172 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MGARPQ8TDB4 240 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 NPRL2Q8WTW4 380 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 RAB8BQ92930 207 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 PHF21BQ96EK2 531 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MAGEB18Q96M61 343 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 EGLN1Q9GZT9 426 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TCF7L1Q9HCS4 588 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TBCCD1Q9NVR7 557 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MYEF2Q9P2K5 600 aaKnown RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 PPP2R2CQ9Y2T4 447 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TRAPPC2LH3BP13 241 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 BCKDHAP12694 445 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 RAD52P43351 418 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MAGEB1P43366 347 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 SELENOPP49908 381 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 NPY4RP50391 375 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MMP15P51511 669 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 GNA13Q14344 377 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MFSD13AQ14CX5 517 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 IMPG1Q17R60 797 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 ARSJQ5FYB0 599 aaPredicted RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 WBP2NLQ6ICG8 309 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 VHLLQ6RSH7 139 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 BTNL3Q6UXE8 466 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 FRRS1Q6ZNA5 592 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 PIWIL3Q7Z3Z3 882 aaKnown RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 CARM1Q86X55 608 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 CREG2Q8IUH2 290 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 RIMKLAQ8IXN7 391 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 GSPT2Q8IYD1 628 aaKnown RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 BCL6BQ8N143 479 aaPredicted RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 OR52E2Q8NGJ4 325 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 LRTOMTQ8WZ04 291 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 HSH2DQ96JZ2 352 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TRNT1Q96Q11 434 aaKnown RBP3.85□□□□□ -1.79
SNCA-213ENST00000618500 SEPHS2Q99611 448 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TAPBPLQ9BX59 468 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 GPR61Q9BZJ8 451 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TSPYL1Q9H0U9 437 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 LZTFL1Q9NQ48 299 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 MMP26Q9NRE1 261 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TAAR3PQ9P1P4 343 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 B3GAT1Q9P2W7 334 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 SEC14L4Q9UDX3 406 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 TGP01266 2768 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 ALMS1Q8TCU4 4167 aa3.85□□□□□ -1.79
SNCA-213ENST00000618500 RNASET2O00584 256 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 LSM1O15116 133 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 HOXA3O43365 443 aaPredicted RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 NPHS1O60500 1241 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 KRT33AO76009 404 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 PPP1R3DO95685 299 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 RAB36O95755 333 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 AHCYP23526 432 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 MVKQ03426 396 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 LRRC74AQ0VAA2 488 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 BST1Q10588 318 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 CAMK2DQ13557 499 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 LASP1Q14847 261 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 LARS2Q15031 903 aaKnown RBP3.84□□□□□ -1.79
SNCA-213ENST00000618500 KANK2Q63ZY3 851 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 TMEM53Q6P2H8 277 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 NIPAL3Q6P499 406 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 LRRC74BQ6ZQY2 392 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 SPATC1Q76KD6 591 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 ZER1Q7Z7L7 766 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 CTAGE3PQ8IX95 158 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 GPR137CQ8N3F9 429 aa3.84□□□□□ -1.79
SNCA-213ENST00000618500 PAPD5Q8NDF8 572 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms