RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ALG1L2C9J202 215 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 PLA2G10O15496 165 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 RAD1O60671 282 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 PRKCAP17252 672 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 PGCP20142 388 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SDHAP31040 664 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 NANOS3P60323 173 aaKnown RBP11.25□□□□□ -0.61
CIITA-212ENST00000618207 CDK5R1Q15078 307 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 INPP5JQ15735 1006 aaPredicted RBP11.25□□□□□ -0.61
CIITA-212ENST00000618207 COL28A1Q2UY09 1125 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 LINC01590Q5TEZ4 76 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SLC6A19Q695T7 634 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SLC35D2Q76EJ3 337 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 POMGNT2Q8NAT1 580 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 OR5H6Q8NGV6 325 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SAP25Q8TEE9 199 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 DDOQ99489 341 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SPOCK3Q9BQ16 436 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 TMEM43Q9BTV4 400 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 SLC19A3Q9BZV2 496 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 GTF2A1LQ9UNN4 478 aa11.25□□□□□ -0.61
CIITA-212ENST00000618207 TMED7-TICAM2A0A0A6YYA0 188 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 LY6G6EA0A0G2JKS1 128 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TRBV11-1A0A0K0K1C0 115 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TEX51A0A1B0GUA7 166 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 H3BML4 177 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 GLCEO94923 617 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 PSKH1P11801 424 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 RAB3BP20337 219 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 MTNR1BP49286 362 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 NRG3P56975 720 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TAS2R43P59537 309 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 DCAF7P61962 342 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 GPR50Q13585 617 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 ETFDHQ16134 617 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.24□□□□□ -0.61
CIITA-212ENST00000618207 LRRC69Q6ZNQ3 347 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 RDH10Q8IZV5 341 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 YIPF7Q8N8F6 280 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 APCDD1LQ8NCL9 501 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 OR4M1Q8NGD0 313 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TRMT10AQ8TBZ6 339 aaKnown RBP11.24□□□□□ -0.61
CIITA-212ENST00000618207 UBASH3BQ8TF42 649 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 SMIM19Q96E16 107 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 DMRTB1Q96MA1 342 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TAS2R10Q9NYW0 307 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 SUSD2Q9UGT4 822 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TMED7Q9Y3B3 224 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 U3KQA8 63 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TECTAO75443 2155 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 NUP210LQ5VU65 1888 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 A0A1B0GTQ1 180 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 CCNKO75909 580 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 CASP3P42574 277 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 NR4A2P43354 598 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 EMP2P54851 167 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 CLDN12P56749 244 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 B2MP61769 119 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 ACTA2P62736 377 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 ACTG2P63267 376 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 RSBN1Q5VWQ0 802 aaPredicted RBP11.24□□□□□ -0.61
CIITA-212ENST00000618207 HBMQ6B0K9 141 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 ANKRD37Q7Z713 158 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 IZUMO1Q8IYV9 350 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 GDPD1Q8N9F7 314 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 LRRC75AQ8NAA5 344 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 OR8K3Q8NH51 312 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 ENKURQ8TC29 256 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 ADAM19Q9H013 955 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 TMEM185BQ9H7F4 350 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 PPP1R3EQ9H7J1 279 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 EXOSC3Q9NQT5 275 aaKnown RBP11.24□□□□□ -0.61
CIITA-212ENST00000618207 SRPK3Q9UPE1 567 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 PCDHGB7Q9Y5F8 929 aa11.24□□□□□ -0.61
CIITA-212ENST00000618207 PHF3Q92576 2039 aaKnown RBP11.24□□□□□ -0.61
CIITA-212ENST00000618207 B4DXG7 233 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 DOK2O60496 412 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ALOX12BO75342 701 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ZNF254O75437 659 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 KIR2DL3P43628 341 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 PNLIPRP2P54317 469 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ACY1Q03154 408 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 CBFBQ13951 182 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 PMS2CLQ68D20 193 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 RAB43Q86YS6 212 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ARL5BQ96KC2 179 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ZFP3Q96NJ6 502 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 CRB3Q9BUF7 120 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 DUSP23Q9BVJ7 150 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ULBP3Q9BZM4 244 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 NOX4Q9NPH5 578 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 BRD7Q9NPI1 651 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 DCAF16Q9NXF7 216 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 TAS2R5Q9NYW4 299 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 NLKQ9UBE8 527 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ATPIF1Q9UII2 106 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 ADAMTS20P59510 1910 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 LANCL1O43813 399 aa11.23□□□□□ -0.61
CIITA-212ENST00000618207 TSPAN9O75954 239 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms