RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ZBED5Q49AG3 693 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 SLC35D2Q76EJ3 337 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 GABRG1Q8N1C3 465 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 STEAP2Q8NFT2 490 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 OR13C2Q8NGS9 318 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 OR51A7Q8NH64 312 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
MDC1-209ENST00000613547 B3GAT2Q9NPZ5 323 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 SLC7A10Q9NS82 523 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 ARMC1Q9NVT9 282 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 MED29Q9NX70 200 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 GPR52Q9Y2T5 361 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 AP4S1Q9Y587 144 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 U3KQV3 271 aa11.73□□□□□ -0.53
MDC1-209ENST00000613547 TRAV27A0A087WT01 109 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 UNC119BA6NIH7 251 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 NPIPB13A6NJU9 1138 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 NPIPB4C9JG80 1138 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 ZNF587BE7ETH6 402 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 CDC42EP2O14613 210 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 CLOCKO15516 846 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 HNRNPRO43390 633 aaKnown RBP11.72□□□□□ -0.53
MDC1-209ENST00000613547 NDUFB2O95178 105 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 TSPAN19P0C672 248 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 FCGR1AP12314 374 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 IFNGR1P15260 489 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 PPP3CBP16298 524 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 NTF4P34130 210 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 UGT2B10P36537 528 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 RPL4P36578 427 aaKnown RBP11.72□□□□□ -0.53
MDC1-209ENST00000613547 KIR2DL3P43628 341 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 SELENOPP49908 381 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 ACTR3P61158 418 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 TGFBR3Q03167 851 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 FAPQ12884 760 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 LAPTM4AQ15012 233 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 TSPO2Q5TGU0 170 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 C1orf94Q6P1W5 598 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 STAC2Q6ZMT1 411 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 CXorf67Q86X51 503 aaPredicted RBP11.72□□□□□ -0.53
MDC1-209ENST00000613547 MEX3DQ86XN8 651 aaKnown RBP11.72□□□□□ -0.53
MDC1-209ENST00000613547 DMRTC2Q8IXT2 367 aaPredicted RBP11.72□□□□□ -0.53
MDC1-209ENST00000613547 GPR137CQ8N3F9 429 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 OR4C15Q8NGM1 316 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 OR6N1Q8NGY5 312 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 OR6X1Q8NH79 312 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 MOSPD2Q8NHP6 518 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 GNPDA2Q8TDQ7 276 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 DUS3LQ96G46 650 aaKnown RBP11.72□□□□□ -0.53
MDC1-209ENST00000613547 OR2M2Q96R28 347 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 TNFRSF13CQ96RJ3 184 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 LINC00470Q9BZP3 86 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 OR10A4Q9H209 315 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 MCCC2Q9HCC0 563 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 TAS2R16Q9NYV7 291 aa11.72□□□□□ -0.53
MDC1-209ENST00000613547 MED12LQ86YW9 2145 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 CIB4A0PJX0 185 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 SLC35F4A4IF30 521 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 TIPRLO75663 272 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 NR2C1P13056 603 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 IGFBP2P18065 325 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 EDNRAP25101 427 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 FASP25445 335 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 DNAJA1P31689 397 aaKnown RBP11.71□□□□□ -0.53
MDC1-209ENST00000613547 BIDP55957 195 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 TSPAN31Q12999 210 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 KPNB1Q14974 876 aaKnown RBP11.71□□□□□ -0.53
MDC1-209ENST00000613547 ACKR1Q16570 336 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 MICAQ29983 383 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 SFRP5Q5T4F7 317 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 CARD17Q5XLA6 110 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 FAM205BPQ63HN1 556 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 ZFP1Q6P2D0 407 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 PGBD2Q6P3X8 592 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 ZER1Q7Z7L7 766 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 TMEM123Q8N131 208 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 FANK1Q8TC84 345 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 ZNF566Q969W8 418 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 SLCO4A1Q96BD0 722 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 SLC25A44Q96H78 314 aaPredicted RBP11.71□□□□□ -0.53
MDC1-209ENST00000613547 TXNDC15Q96J42 360 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 LRR1Q96L50 414 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 MED18Q9BUE0 208 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 EMC6Q9BV81 110 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 VNN3Q9NY84 501 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 MGAT4BQ9UQ53 548 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 SIGLEC7Q9Y286 467 aa11.71□□□□□ -0.53
MDC1-209ENST00000613547 DOPEY2Q9Y3R5 2298 aa11.71□□□□□ -0.54
MDC1-209ENST00000613547 INTS1Q8N201 2190 aaKnown RBP11.7□□□□□ -0.54
MDC1-209ENST00000613547 SH3D21A4FU49 640 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ARRDC5A6NEK1 342 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 CASKO14936 926 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 KLF4O43474 513 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 LYZL6O75951 148 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 ZNF432O94892 652 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 IGHG1P01857 330 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 COX5AP20674 150 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 GSTM3P21266 225 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 IGHV1-2P23083 117 aa11.7□□□□□ -0.54
MDC1-209ENST00000613547 COL8A1P27658 744 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms