RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 BCL2L2Q92843 193 aaPredicted RBP15.04■□□□□ -0
HERC3-214ENST00000601319 NEUROG1Q92886 237 aa15.04■□□□□ -0
HERC3-214ENST00000601319 LRR1Q96L50 414 aa15.04■□□□□ -0
HERC3-214ENST00000601319 GRIP2Q9C0E4 1043 aa15.04■□□□□ -0
HERC3-214ENST00000601319 NELFAQ9H3P2 528 aa15.04■□□□□ -0
HERC3-214ENST00000601319 NANSQ9NR45 359 aa15.04■□□□□ -0
HERC3-214ENST00000601319 RIMS3Q9UJD0 308 aa15.04■□□□□ -0
HERC3-214ENST00000601319 ZANQ9Y493 2812 aa15.04■□□□□ -0
HERC3-214ENST00000601319 NSD1Q96L73 2696 aaPredicted RBP15.04■□□□□ -0
HERC3-214ENST00000601319 OVOL3O00110 214 aa15.03■□□□□ -0
HERC3-214ENST00000601319 CXCR6O00574 342 aa15.03■□□□□ -0
HERC3-214ENST00000601319 CH25HO95992 272 aa15.03■□□□□ -0
HERC3-214ENST00000601319 MT-ND1P03886 318 aa15.03■□□□□ -0
HERC3-214ENST00000601319 ASAH2BP0C7U1 165 aa15.03■□□□□ -0
HERC3-214ENST00000601319 CDH2P19022 906 aaPredicted RBP15.03■□□□□ -0
HERC3-214ENST00000601319 OR1E2P47887 323 aa15.03■□□□□ -0
HERC3-214ENST00000601319 PGGHGQ32M88 737 aa15.03■□□□□ -0
HERC3-214ENST00000601319 C3orf36Q3SXR2 165 aa15.03■□□□□ -0
HERC3-214ENST00000601319 SLC46A3Q7Z3Q1 461 aa15.03■□□□□ -0
HERC3-214ENST00000601319 DTX2Q86UW9 622 aa15.03■□□□□ -0
HERC3-214ENST00000601319 C20orf196Q8IYI0 205 aa15.03■□□□□ -0
HERC3-214ENST00000601319 PERPQ96FX8 193 aa15.03■□□□□ -0
HERC3-214ENST00000601319 TPD52L3Q96J77 140 aa15.03■□□□□ -0
HERC3-214ENST00000601319 PRRC1Q96M27 445 aa15.03■□□□□ -0
HERC3-214ENST00000601319 GPR35Q9HC97 309 aa15.03■□□□□ -0
HERC3-214ENST00000601319 SPAG4Q9NPE6 437 aa15.03■□□□□ -0
HERC3-214ENST00000601319 MEPEQ9NQ76 525 aaPredicted RBP15.03■□□□□ -0
HERC3-214ENST00000601319 FAIMQ9NVQ4 179 aa15.03■□□□□ -0
HERC3-214ENST00000601319 USF3Q68DE3 2245 aa15.02■□□□□ -0
HERC3-214ENST00000601319 NIPBLQ6KC79 2804 aaeCLIP15.02■□□□□ -0
HERC3-214ENST00000601319 HTR3EA5X5Y0 456 aa15.02■□□□□ -0
HERC3-214ENST00000601319 M0R1B8 84 aa15.02■□□□□ -0
HERC3-214ENST00000601319 KPNA4O00629 521 aaPredicted RBP15.02■□□□□ -0
HERC3-214ENST00000601319 DYNC1I1O14576 645 aa15.02■□□□□ -0
HERC3-214ENST00000601319 OR6A2O95222 327 aa15.02■□□□□ -0
HERC3-214ENST00000601319 SOD3P08294 240 aa15.02■□□□□ -0
HERC3-214ENST00000601319 ADORA3P0DMS8 318 aa15.02■□□□□ -0
HERC3-214ENST00000601319 GYS2P54840 703 aa15.02■□□□□ -0
HERC3-214ENST00000601319 SPOCK1Q08629 439 aa15.02■□□□□ -0
HERC3-214ENST00000601319 PIN1Q13526 163 aaPredicted RBP15.02■□□□□ -0
HERC3-214ENST00000601319 ZNF627Q7L945 461 aa15.02■□□□□ -0
HERC3-214ENST00000601319 PIGWQ7Z7B1 504 aa15.02■□□□□ -0
HERC3-214ENST00000601319 FAM169BQ8N8A8 192 aa15.02■□□□□ -0
HERC3-214ENST00000601319 TMEM255BQ8WV15 326 aa15.02■□□□□ -0
HERC3-214ENST00000601319 TMEM239Q8WW34 195 aa15.02■□□□□ -0
HERC3-214ENST00000601319 LIPHQ8WWY8 451 aa15.02■□□□□ -0
HERC3-214ENST00000601319 GEMIN6Q8WXD5 167 aaKnown RBP15.02■□□□□ -0
HERC3-214ENST00000601319 ADAD1Q96M93 576 aaKnown RBP15.02■□□□□ -0
HERC3-214ENST00000601319 HS6ST2Q96MM7 605 aa15.02■□□□□ -0
HERC3-214ENST00000601319 CRLF2Q9HC73 371 aa15.02■□□□□ -0
HERC3-214ENST00000601319 MED29Q9NX70 200 aa15.02■□□□□ -0
HERC3-214ENST00000601319 TAS2R5Q9NYW4 299 aa15.02■□□□□ -0
HERC3-214ENST00000601319 CISD1Q9NZ45 108 aaKnown RBP15.02■□□□□ -0
HERC3-214ENST00000601319 GMPR2Q9P2T1 348 aaKnown RBP15.02■□□□□ -0
HERC3-214ENST00000601319 CRNNQ9UBG3 495 aaPredicted RBP15.02■□□□□ -0
HERC3-214ENST00000601319 LAMP3Q9UQV4 416 aa15.02■□□□□ -0
HERC3-214ENST00000601319 ARL2BPQ9Y2Y0 163 aa15.02■□□□□ -0
HERC3-214ENST00000601319 ALPK2Q86TB3 2170 aa15.02□□□□□ -0.01
HERC3-214ENST00000601319 SLC35F4A4IF30 521 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 ZNF99A8MXY4 864 aaPredicted RBP15.01□□□□□ -0.01
HERC3-214ENST00000601319 SHOX2O60902 331 aaPredicted RBP15.01□□□□□ -0.01
HERC3-214ENST00000601319 IFNW1P05000 195 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 AHCYP23526 432 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 UGT2B15P54855 530 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 UBE2NP61088 152 aaKnown RBP15.01□□□□□ -0.01
HERC3-214ENST00000601319 PSME3P61289 254 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 ARF1P84077 181 aaKnown RBP15.01□□□□□ -0.01
HERC3-214ENST00000601319 ST3GAL3Q11203 375 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 CEACAM16Q2WEN9 425 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 SLC22A25Q6T423 547 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 CBLL1Q75N03 491 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 NANOGNBQ7Z5D8 188 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 NKAIN4Q8IVV8 208 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 OFCC1Q8IZS5 231 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 DEPDC4Q8N2C3 294 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 KCTD14Q9BQ13 255 aaPredicted RBP15.01□□□□□ -0.01
HERC3-214ENST00000601319 TRAF4Q9BUZ4 470 aaPredicted RBP15.01□□□□□ -0.01
HERC3-214ENST00000601319 EMC6Q9BV81 110 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 B3GAT2Q9NPZ5 323 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 A4GNTQ9UNA3 340 aa15.01□□□□□ -0.01
HERC3-214ENST00000601319 GSTA4O15217 222 aa15□□□□□ -0.01
HERC3-214ENST00000601319 DCTN3O75935 186 aa15□□□□□ -0.01
HERC3-214ENST00000601319 OR7A10O76100 309 aa15□□□□□ -0.01
HERC3-214ENST00000601319 IGLV1-44P01699 117 aa15□□□□□ -0.01
HERC3-214ENST00000601319 HIST1H2ABP04908 130 aa15□□□□□ -0.01
HERC3-214ENST00000601319 TSPAN19P0C672 248 aa15□□□□□ -0.01
HERC3-214ENST00000601319 IFNGR1P15260 489 aa15□□□□□ -0.01
HERC3-214ENST00000601319 IFNA8P32881 189 aa15□□□□□ -0.01
HERC3-214ENST00000601319 IFI44LQ53G44 452 aa15□□□□□ -0.01
HERC3-214ENST00000601319 PHYHD1Q5SRE7 291 aa15□□□□□ -0.01
HERC3-214ENST00000601319 HIST3H2AQ7L7L0 130 aa15□□□□□ -0.01
HERC3-214ENST00000601319 YTHDF3Q7Z739 585 aaKnown RBP15□□□□□ -0.01
HERC3-214ENST00000601319 VTCN1Q7Z7D3 282 aa15□□□□□ -0.01
HERC3-214ENST00000601319 CCDC36Q8IYA8 594 aa15□□□□□ -0.01
HERC3-214ENST00000601319 LRRC17Q8N6Y2 441 aa15□□□□□ -0.01
HERC3-214ENST00000601319 OR6X1Q8NH79 312 aa15□□□□□ -0.01
HERC3-214ENST00000601319 HIST1H2ACQ93077 130 aa15□□□□□ -0.01
HERC3-214ENST00000601319 TXNDC15Q96J42 360 aa15□□□□□ -0.01
HERC3-214ENST00000601319 SLC38A2Q96QD8 506 aa15□□□□□ -0.01
HERC3-214ENST00000601319 DHRS9Q9BPW9 319 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms