RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 SIGLEC7Q9Y286 467 aa17.1■□□□□ 0.33
UPF1-209ENST00000600310 OR6C65A6NJZ3 312 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 PTP4A3O75365 173 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 TIPRLO75663 272 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 SERPINI2O75830 405 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 IGHV3-9P01782 118 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 F13BP05160 661 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 IFNGR1P15260 489 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 FPR3P25089 353 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 DNAJA1P31689 397 aaKnown RBP17.09■□□□□ 0.33
UPF1-209ENST00000600310 PEX19P40855 299 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 GSSP48637 474 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 PRPS1P60891 318 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 SORDQ00796 357 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 P2RY6Q15077 328 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 MICAQ29983 383 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 ALG10Q5BKT4 473 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 TSPO2Q5TGU0 170 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 SP5Q6BEB4 398 aaPredicted RBP17.09■□□□□ 0.33
UPF1-209ENST00000600310 SLC35D2Q76EJ3 337 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 POMGNT2Q8NAT1 580 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 OR9Q2Q8NGE9 314 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 GNPDA2Q8TDQ7 276 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 SLCO5A1Q9H2Y9 848 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 DENND2DQ9H6A0 471 aaPredicted RBP17.09■□□□□ 0.33
UPF1-209ENST00000600310 MCCC2Q9HCC0 563 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 SLC7A10Q9NS82 523 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 MALT1Q9UDY8 824 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 CACNA1CQ13936 2221 aa17.09■□□□□ 0.33
UPF1-209ENST00000600310 SLC35F4A4IF30 521 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 UNC119BA6NIH7 251 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 NPIPB13A6NJU9 1138 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 NPIPB4C9JG80 1138 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 CLOCKO15516 846 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 HNRNPRO43390 633 aaKnown RBP17.08■□□□□ 0.32
UPF1-209ENST00000600310 DEAF1O75398 565 aaPredicted RBP17.08■□□□□ 0.32
UPF1-209ENST00000600310 PSMB1P20618 241 aaKnown RBP17.08■□□□□ 0.32
UPF1-209ENST00000600310 IST1P53990 364 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 STAC2Q6ZMT1 411 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 TMEM123Q8N131 208 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 UBE2J2Q8N2K1 259 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 OR6X1Q8NH79 312 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 ADAD1Q96M93 576 aaKnown RBP17.08■□□□□ 0.32
UPF1-209ENST00000600310 OR2M2Q96R28 347 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 SPOCK3Q9BQ16 436 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 EMC6Q9BV81 110 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 LINC00470Q9BZP3 86 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 ASB6Q9NWX5 421 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 UPB1Q9UBR1 384 aa17.08■□□□□ 0.32
UPF1-209ENST00000600310 ICE1Q9Y2F5 2266 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 A0A1W2PRG6 482 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 ARRDC5A6NEK1 342 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 ZNF726A6NNF4 738 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 C16orf97H3BN30 126 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 SLC43A1O75387 559 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 BCL10O95999 233 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 ADAP00813 363 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 FCGR1AP12314 374 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 ZNF26P17031 533 aaPredicted RBP17.07■□□□□ 0.32
UPF1-209ENST00000600310 COX5AP20674 150 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 UGT2B10P36537 528 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 DAP3P51398 398 aaKnown RBP17.07■□□□□ 0.32
UPF1-209ENST00000600310 BIDP55957 195 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 TSPAN31Q12999 210 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 ITGADQ13349 1161 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 ATP6AP1Q15904 470 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 TMEM179BQ7Z7N9 219 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 CXorf67Q86X51 503 aaPredicted RBP17.07■□□□□ 0.32
UPF1-209ENST00000600310 DMRTC2Q8IXT2 367 aaPredicted RBP17.07■□□□□ 0.32
UPF1-209ENST00000600310 C10orf67Q8IYJ2 551 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 AQP11Q8NBQ7 271 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 OR10G2Q8NGC3 310 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 GIPC3Q8TF64 312 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 HDHD5Q9BXW7 423 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 NTN4Q9HB63 628 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 GPR52Q9Y2T5 361 aa17.07■□□□□ 0.32
UPF1-209ENST00000600310 PDLIM1O00151 329 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 E2F6O75461 281 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 UPK3AO75631 287 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 NDUFB2O95178 105 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 GASTP01350 101 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 IGHMP01871 453 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 IGHV1-2P23083 117 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 FASP25445 335 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 CCKARP32238 428 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 CTXN1P60606 82 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 FAPQ12884 760 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 TAF11Q15544 211 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 ACKR1Q16570 336 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 ARMC4Q5T2S8 1044 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 SFRP5Q5T4F7 317 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 ZFP1Q6P2D0 407 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 MEX3BQ6ZN04 569 aaKnown RBP17.06■□□□□ 0.32
UPF1-209ENST00000600310 WDFY1Q8IWB7 410 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 C20orf196Q8IYI0 205 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 PYDC1Q8WXC3 89 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 LRR1Q96L50 414 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 NDEL1Q9GZM8 345 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 OR10A4Q9H209 315 aa17.06■□□□□ 0.32
UPF1-209ENST00000600310 TXNIPQ9H3M7 391 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms