RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 C1orf146Q5VVC0 180 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 PGBD2Q6P3X8 592 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 CASP12Q6UXS9 341 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 NANOGNBQ7Z5D8 188 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
VRK3-219ENST00000600137 UEVLDQ8IX04 471 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 ZNF100Q8IYN0 542 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 ZNF295-AS1Q8N0V1 137 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 OR13C2Q8NGS9 318 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 LINC01560Q8TB33 94 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 APH1AQ96BI3 265 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 OR2M2Q96R28 347 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 C6orf203Q9P0P8 240 aaPredicted RBP12.12□□□□□ -0.47
VRK3-219ENST00000600137 RCE1Q9Y256 329 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 APCP25054 2843 aa12.12□□□□□ -0.47
VRK3-219ENST00000600137 TRAV27A0A087WT01 109 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 C16orf97H3BN30 126 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 HIST1H2ABP04908 130 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 F13BP05160 661 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ITGA5P08648 1049 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 IFNGR1P15260 489 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 HOXB6P17509 224 aaKnown RBP12.11□□□□□ -0.47
VRK3-219ENST00000600137 SLC9A3P48764 834 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ACTR3P61158 418 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 RUNX1T1Q06455 604 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 P2RY6Q15077 328 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ANKDD1AQ495B1 522 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ZBED5Q49AG3 693 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ARMC4Q5T2S8 1044 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ZNF787Q6DD87 383 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 NIPAL3Q6P499 406 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 THSD4Q6ZMP0 1018 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 MEX3BQ6ZN04 569 aaKnown RBP12.11□□□□□ -0.47
VRK3-219ENST00000600137 SLC35D2Q76EJ3 337 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 HIST3H2AQ7L7L0 130 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 RRM2BQ7LG56 351 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 OAFQ86UD1 273 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 STK32CQ86UX6 486 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ZNF433Q8N7K0 673 aaPredicted RBP12.11□□□□□ -0.47
VRK3-219ENST00000600137 ANKK1Q8NFD2 765 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 OR51A7Q8NH64 312 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 HIST1H2ACQ93077 130 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
VRK3-219ENST00000600137 WFIKKN1Q96NZ8 548 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 LINC00470Q9BZP3 86 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 SLCO5A1Q9H2Y9 848 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ARMC1Q9NVT9 282 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 TMEM5Q9Y2B1 443 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 ABCA4P78363 2273 aa12.11□□□□□ -0.47
VRK3-219ENST00000600137 NPIPB13A6NJU9 1138 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 NPIPB4C9JG80 1138 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 RPL36A-HNRNPH2H7BZ11 118 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 CLOCKO15516 846 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 RNF13O43567 381 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 TIPRLO75663 272 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 OR6A2O95222 327 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 CST1P01037 141 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 GASTP01350 101 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 TP53P04637 393 aaPredicted RBP12.1□□□□□ -0.47
VRK3-219ENST00000600137 THBDP07204 575 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 SAGP10523 405 aaPredicted RBP12.1□□□□□ -0.47
VRK3-219ENST00000600137 FAPQ12884 760 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 ITGADQ13349 1161 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 C1DQ13901 141 aaKnown RBP12.1□□□□□ -0.47
VRK3-219ENST00000600137 MICAQ29983 383 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 ANKRD34AQ69YU3 496 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 KIF18BQ86Y91 864 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 C20orf196Q8IYI0 205 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 CDK20Q8IZL9 346 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 OR9Q2Q8NGE9 314 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 OR6X1Q8NH79 312 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 BOD1Q96IK1 185 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 LRR1Q96L50 414 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 MRPL13Q9BYD1 178 aaKnown RBP12.1□□□□□ -0.47
VRK3-219ENST00000600137 DENND2DQ9H6A0 471 aaPredicted RBP12.1□□□□□ -0.47
VRK3-219ENST00000600137 INIPQ9NRY2 104 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 CRIM1Q9NZV1 1036 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 GPR52Q9Y2T5 361 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 U3KQV3 271 aa12.1□□□□□ -0.47
VRK3-219ENST00000600137 ABCA12Q86UK0 2595 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 FAM221AA4D161 298 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 OR10H3O60404 316 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 SERPINI2O75830 405 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 LYZL6O75951 148 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 IGHMP01871 453 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 FPR3P25089 353 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 BIDP55957 195 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 CAMK2DQ13557 499 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 MELKQ14680 651 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 KPNB1Q14974 876 aaKnown RBP12.09□□□□□ -0.47
VRK3-219ENST00000600137 GABRA6Q16445 453 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 ACKR1Q16570 336 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 HIST3H3Q16695 136 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 ALG10Q5BKT4 473 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 LRFN4Q6PJG9 635 aa12.09□□□□□ -0.47
VRK3-219ENST00000600137 SEZ6L2Q6UXD5 910 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms