RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 RNFT1Q5M7Z0 435 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 HBMQ6B0K9 141 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 RPUSD3Q6P087 351 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 UBQLNLQ8IYU4 475 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 MEIOBQ8N635 442 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 TMEM99Q8N816 258 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 OR52E2Q8NGJ4 325 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 OR2V1Q8NHB1 315 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 OTULINQ96BN8 352 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 CMC2Q9NRP2 79 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 SEC14L4Q9UDX3 406 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 BLOC1S6Q9UL45 172 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 B3GNT3Q9Y2A9 372 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 TP53TG5Q9Y2B4 290 aa11.7□□□□□ -0.54
SHKBP1-209ENST00000595803 MPDZO75970 2070 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 CNTRLQ7Z7A1 2325 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 TNRC6AQ8NDV7 1962 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 NCKAP5O14513 1909 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 SH3D21A4FU49 640 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 PRR23D1E9PI22 279 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 DNPH1O43598 174 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 WBP4O75554 376 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 SERPINI2O75830 405 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 SLC2A10O95528 541 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 PRR23D2P0DMB1 279 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF3P17036 446 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 PAICSP22234 425 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 GNLYP22749 145 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 ACVR2AP27037 513 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 EIF1AXP47813 144 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 SUCLG1P53597 346 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 CLDN20P56880 219 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 RAC3P60763 192 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 RPS3AP61247 264 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 SRYQ05066 204 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 PUDPQ08623 228 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 C1DQ13901 141 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF239Q16600 458 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 PLEKHN1Q494U1 663 aaPredicted RBP11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 EMC4Q5J8M3 183 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 SLC25A30Q5SVS4 291 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 GPR139Q6DWJ6 353 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 PAQR6Q6TCH4 344 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 CHMP1BQ7LBR1 199 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 JAZF1Q86VZ6 243 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 KDM8Q8N371 416 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 ADPRHL1Q8NDY3 354 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 ANKK1Q8NFD2 765 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 OR4K13Q8NH42 304 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 NEIL3Q8TAT5 605 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 APH1BQ8WW43 257 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 Q96M85 177 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 OXGR1Q96P68 337 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 FN3KQ9H479 309 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 ZDHHC11Q9H8X9 412 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 RASD1Q9Y272 281 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 GPR52Q9Y2T5 361 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 FREM3P0C091 2139 aa11.69□□□□□ -0.54
SHKBP1-209ENST00000595803 PTGES3LE9PB15 166 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 NPIPA5E9PKD4 350 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CXCL13O43927 109 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 FZD7O75084 574 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 ENTPD6O75354 484 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CLDN1O95832 211 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 TXNDC12O95881 172 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 BCL10O95999 233 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 PLGP00747 810 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CRYABP02511 175 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CCDC159P0C7I6 412 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 HIST1H1CP16403 213 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 ENPP1P22413 925 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 EEF1B2P24534 225 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 SDHAP31040 664 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 ACVR1BP36896 505 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 LHX2P50458 406 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 AGFG1P52594 562 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CLDN15P56746 228 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 RPL27P61353 136 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 ITGADQ13349 1161 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 SMN1Q16637 294 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 TMEM201Q5SNT2 666 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 LAIR2Q6ISS4 152 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 TRILQ7L0X0 811 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CXXC5Q7LFL8 322 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 PXKQ7Z7A4 578 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 GGNQ86UU5 652 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CPOQ8IVL8 374 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 CCDC103Q8IW40 242 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 UEVLDQ8IX04 471 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 LRR1Q96L50 414 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF582Q96NG8 517 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 TXNIPQ9H3M7 391 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 ZNF696Q9H7X3 374 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 PLCXD1Q9NUJ7 323 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 DNAJC27Q9NZQ0 273 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 NPIPA1Q9UND3 350 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 ADAM18Q9Y3Q7 739 aa11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 RPL36Q9Y3U8 105 aaKnown RBP11.68□□□□□ -0.54
SHKBP1-209ENST00000595803 TEX13CA0A0J9YWL9 993 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms