RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 SFTPDP35247 375 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 ERVK-25P63136 954 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 PLGLB1Q02325 96 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 TMED1Q13445 227 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 MS4A18Q3C1V0 323 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 WIPI1Q5MNZ9 446 aaPredicted RBP12.07□□□□□ -0.48
VMP1-217ENST00000593168 SLC35F1Q5T1Q4 408 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 FAM122BQ7Z309 247 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.07□□□□□ -0.48
VMP1-217ENST00000593168 IGFN1Q86VF2 1251 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 SLC22A16Q86VW1 577 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 OR52E2Q8NGJ4 325 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 MYDGFQ969H8 173 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 DNAJA3Q96EY1 480 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 OR5B2Q96R09 309 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 DDOQ99489 341 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 AMBNQ9NP70 447 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 MRPS18AQ9NVS2 196 aaKnown RBP12.07□□□□□ -0.48
VMP1-217ENST00000593168 PAK1IP1Q9NWT1 392 aaPredicted RBP12.07□□□□□ -0.48
VMP1-217ENST00000593168 H2AFY2Q9P0M6 372 aaPredicted RBP12.07□□□□□ -0.48
VMP1-217ENST00000593168 SEC14L4Q9UDX3 406 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.07□□□□□ -0.48
VMP1-217ENST00000593168 PCDHGB7Q9Y5F8 929 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 LOC102725191A0A1B0GVB3 256 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 A0A1W2PNV4 684 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 IRGMA1A4Y4 181 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 NPIPB13A6NJU9 1138 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 NPIPB4C9JG80 1138 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PRR23D1E9PI22 279 aaPredicted RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 ACOT7O00154 380 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 SULT2B1O00204 365 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 SEC14L5O43304 696 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 RNF13O43567 381 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 DNPH1O43598 174 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 RGS10O43665 173 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 EIF1BO60739 113 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 IGHMP01871 453 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 OPN1LWP04000 364 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 F13BP05160 661 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 TFAP2AP05549 437 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 HTR1AP08908 422 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PRR23D2P0DMB1 279 aaPredicted RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 DBTP11182 482 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 HIST1H1CP16403 213 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 PAICSP22234 425 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 AHCYP23526 432 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 ACVR2AP27037 513 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 SDHAP31040 664 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 RPL5P46777 297 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 DIO1P49895 249 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 NUDT6P53370 316 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 NR1H2P55055 460 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 GFRA1P56159 465 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 OR2B6P58173 313 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PPIAP62937 165 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.06□□□□□ -0.48
VMP1-217ENST00000593168 PUDPQ08623 228 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PRR30Q53SZ7 412 aaPredicted RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PAQR6Q6TCH4 344 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 AHSA2Q719I0 299 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 CXXC5Q7LFL8 322 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 PRSS48Q7RTY5 328 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 BCDIN3DQ7Z5W3 292 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 PXKQ7Z7A4 578 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 GID4Q8IVV7 300 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 FAM109AQ8N4B1 249 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 ZADH2Q8N4Q0 377 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 FAM98AQ8NCA5 519 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 SLC37A3Q8NCC5 494 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 SGCDQ92629 289 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PTP4A1Q93096 173 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 Q96M85 177 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 KLHL15Q96M94 604 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 SNX18Q96RF0 628 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 SIGLEC11Q96RL6 698 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 COPS4Q9BT78 406 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 MFRPQ9BY79 579 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 TXNIPQ9H3M7 391 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 ACKR4Q9NPB9 350 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 ERVK-18Q9QC07 812 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 GRHPRQ9UBQ7 328 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 ZNF346Q9UL40 294 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 ADAM18Q9Y3Q7 739 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PCDHGB1Q9Y5G3 927 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 SNX5Q9Y5X3 404 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 PRRC2CQ9Y520 2896 aaKnown RBP12.06□□□□□ -0.48
VMP1-217ENST00000593168 CSMD1Q96PZ7 3565 aa12.06□□□□□ -0.48
VMP1-217ENST00000593168 NCKAP5O14513 1909 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 A0A0J9YW62 118 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 TEX13CA0A0J9YWL9 993 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 C11orf98E9PRG8 122 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 AKR7A3O95154 331 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 CLDN1O95832 211 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 CDK1P06493 297 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 HTR1FP30939 366 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 MAGEA5P43359 124 aa12.05□□□□□ -0.48
VMP1-217ENST00000593168 P2RY4P51582 365 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms