RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZDHHC13Q8IUH4 622 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 LURAP1LQ8IV03 231 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 TUSC5Q8IXB3 177 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 RNF113BQ8IZP6 322 aaKnown RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 ZIC4Q8N9L1 334 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 CPNE4Q96A23 557 aaPredicted RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 EME1Q96AY2 570 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 INTS12Q96CB8 462 aaKnown RBP8.56□□□□□ -1.04
DDX39A-220ENST00000593008 RASD2Q96D21 266 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 EMC6Q9BV81 110 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 OSBPL10Q9BXB5 764 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 ASPNQ9BXN1 380 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 OR52D1Q9H346 318 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 RIBC2Q9H4K1 309 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 C12orf49Q9H741 205 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 DCLRE1BQ9H816 532 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 CALHM2Q9HA72 323 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 MGAT4BQ9UQ53 548 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 TRAPPC4Q9Y296 219 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 HIF3AQ9Y2N7 669 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 CDH10Q9Y6N8 788 aa8.56□□□□□ -1.04
DDX39A-220ENST00000593008 LRBAP50851 2863 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 A0A1W2PNV4 684 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 ARRDC5A6NEK1 342 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 HSPB2A8KAH6 182 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 CASQ2O14958 399 aaPredicted RBP8.55□□□□□ -1.04
DDX39A-220ENST00000593008 RNF13O43567 381 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 OR2T1O43869 369 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 CYTIPO60759 359 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 SLC2A10O95528 541 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 SNAP29O95721 258 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 MT-ATP6P00846 226 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 TSPAN19P0C672 248 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 IFNGR1P15260 489 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 AGTR1P30556 359 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 TIMP3P35625 211 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 SELENOPP49908 381 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 PUDPQ08623 228 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 RASGEF1BQ0VAM2 473 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 RIPK1Q13546 671 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 SLC17A1Q14916 467 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 GUSBP1Q15486 140 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 HSPB2Q16082 182 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 ACKR1Q16570 336 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 ZBED5Q49AG3 693 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 ALG10Q5BKT4 473 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 PHYHD1Q5SRE7 291 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 GTF2IRD2BQ6EKJ0 949 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 C5orf46Q6UWT4 87 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 GTF2IRD2Q86UP8 949 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF295-AS1Q8N0V1 137 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 SVOPLQ8N434 492 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 SCAIQ8N9R8 606 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 RELL2Q8NC24 303 aaPredicted RBP8.55□□□□□ -1.04
DDX39A-220ENST00000593008 OR6S1Q8NH40 331 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 LIPHQ8WWY8 451 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 HTRA1Q92743 480 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 NRBF2Q96F24 287 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 Q96M85 177 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 DOCK7Q96N67 2140 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 KATNB1Q9BVA0 655 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 PRRG4Q9BZD6 226 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 FN3KQ9H479 309 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 RNF122Q9H9V4 155 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 TIGARQ9NQ88 270 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
DDX39A-220ENST00000593008 KRT84Q9NSB2 600 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 TBC1D23Q9NUY8 699 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 USE1Q9NZ43 259 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 AASSQ9UDR5 926 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF346Q9UL40 294 aaKnown RBP8.55□□□□□ -1.04
DDX39A-220ENST00000593008 MCTS1Q9ULC4 181 aaKnown RBP8.55□□□□□ -1.04
DDX39A-220ENST00000593008 TMEM5Q9Y2B1 443 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 ZNF175Q9Y473 711 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 FLVCR1Q9Y5Y0 555 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 PKDREJQ9NTG1 2253 aa8.55□□□□□ -1.04
DDX39A-220ENST00000593008 MED12LQ86YW9 2145 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CACNA1CQ13936 2221 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CACNA1DQ01668 2161 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 IGKV1D-43A0A0B4J1Z2 117 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 TEX13CA0A0J9YWL9 993 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 MBD3L4A6NDZ8 208 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 MBD3L3A6NE82 208 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 MBD3L5A6NJ08 208 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CD8B2A6NJW9 211 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 EEF1E1-BLOC1S5C9J1V9 151 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 H3BN98 237 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 DVL2O14641 736 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 EEF1E1O43324 174 aaKnown RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 TNFSF13O75888 250 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CLIC3O95833 236 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 IGF2P01344 180 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 TMIGD3P0DMS9 266 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CEACAM8P31997 349 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 RPL4P36578 427 aaKnown RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 PTDSS1P48651 473 aaKnown RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 ALDH3A2P51648 485 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 AQP4P55087 323 aa8.54□□□□□ -1.04
DDX39A-220ENST00000593008 FOXG1P55316 489 aaPredicted RBP8.54□□□□□ -1.04
DDX39A-220ENST00000593008 CLDN17P56750 224 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms